Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00296 ATGGCATGCCTTCATGATGAATCTGTCTCATCTGCTCCTACACGGGCTTATGAAACTAAACCCCAGCAAAGTGTCATAGACCTTGAAGCCACTACACTAGAAATGGAAGCTTTTAGAGGTCCAAGAAAGATGAATAGAGGAGAAGGTGAAGGTGTGGCTCAGAAAGAAGAGATCGGTATCTGCTTAACATGGAAGGATGTATGGGTGACAGCTTCCAATAAAAAAAATGGAAGCAAATCAATTCTTCAAAGGCTAACTGGTTATGCCAAGCCAGGGCAACTCTTGGCAATAATGGGTCCCTCAGGCTGTGGCAAATCAACACTACTTGATACTTTAGCAGGGAGATTAGGTTCAAACAGAAGGCAGGCCGGGGAGATTCTGATCAATGGTCACAAACAAGCACTGTCTTATGGAACCTCAGCATATGTCACACAAGATGATACATTACTCACCACCTTAACGGTTAGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTGCCTGATACCATGTCCACAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTTGTAAAGGCATTAGTGGAGGTCAGAAGAAGAGAGTGAGCATCTGCATCGAGATCCTAACACGCCCTAAACTTCTGTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGTTGCCCTTGCTCAAAATGACCACATTCAGAGAACCGTTATTGCGTCAATCCACCAGCCTAGCAGTGAAGTTTTCCAACTCTTCAATAACCTTTGTCTTCTCTCTTCGGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTTGCTTCAAGTGGTTTTCCTTGTTCTTCTCTTATGAATCCATCTGATCATTTACTGAAAACTATCAACAAGGATTTTGATAAGGACATCGAGGTGGGTTTAGCAGGAACTAGAAACATACCTACAGAAGAAGTAATCCACATCCTTGTGAACTCATACAAATCATCTGAAAGGAACCAAGAAGTTCACAATGAAGTAGCTGTACTATCTAAGAAGGACATCGGTTCATTAGATATTAAGAGAGGGAATGCAGGCTTCCTTAATCAATGCTTAGTTCTTACCAAAAGATCGTTCATTAATATGCATCGTGATCTTGGCTATTATTGGTTACGTTTCGTCATATATGTTGCATTGGCCATAACTTTAGCCAGTGTTTTCTATGATTTGGGCAAAAGTTATGACTCAATTAAGGATCGAGGTTCACTTGTTGCATTTATAAATGGATTCATTACTTTCATGACCATTGGTGGATTTCCTTCCTTTGTGGAAGTCATGAAGGTATATCAACGAGAAAGACAAAATGGGCATTATGGTGTGACTGCATTTGTCATTGGGAACACCTTGTCATCTGTCCCATACTTGCTATTGGTTACATTCATTCCTGGGGCTATATCTTATTACCTTCCCGGTCTTCAGAAGGGATGCCAGCACTTTCTGTATTTCATTTGTGTTTTATTTTCTAGTCTCATGTTAGTGGAGAGTCTTATGATGATAGTTGCGAGCGCTGTTCCCAACTTTCTAATGGGCATCATAACTGGTTCTGGAATTCAAGGAATCATGCTTTTACTTTGTGGCTTCTTTAAATTGCCAAATCATATTCCTAAGCCAGTTTGGAAATACCCATTACACTATGTTGCCTTTCATACGTATGCCAACCAAGGAATGTTCAAGAACGAGTATGAAGGACTAAGATTTGCTTCCAATGAAGCTGGAGGAGGTTACATAAGTGGTGAAGAGGTTTTAAGAAATACATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTAATAGGGATGATTGTTGTGTATAGAGTTTTACTTTTGGTTATCATCAAGGTTAAAGAGAAGATGAAGCCCGTTGTTGTATCAATATCGTGCATGTCATCTTCTCCCAAGAAAACAATACAGGTCATGGAAAACCCCAACGCCACTCCTTTACATTGA 2070 0.4048 MACLHDESVSSAPTRAYETKPQQSVIDLEATTLEMEAFRGPRKMNRGEGEGVAQKEEIGICLTWKDVWVTASNKKNGSKSILQRLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNRRQAGEILINGHKQALSYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDTMSTEEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKKRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIVALAQNDHIQRTVIASIHQPSSEVFQLFNNLCLLSSGKTVYFGPASAASEFFASSGFPCSSLMNPSDHLLKTINKDFDKDIEVGLAGTRNIPTEEVIHILVNSYKSSERNQEVHNEVAVLSKKDIGSLDIKRGNAGFLNQCLVLTKRSFINMHRDLGYYWLRFVIYVALAITLASVFYDLGKSYDSIKDRGSLVAFINGFITFMTIGGFPSFVEVMKVYQRERQNGHYGVTAFVIGNTLSSVPYLLLVTFIPGAISYYLPGLQKGCQHFLYFICVLFSSLMLVESLMMIVASAVPNFLMGIITGSGIQGIMLLLCGFFKLPNHIPKPVWKYPLHYVAFHTYANQGMFKNEYEGLRFASNEAGGGYISGEEVLRNTWQVDMSYSKWVDLAILIGMIVVYRVLLLVIIKVKEKMKPVVVSISCMSSSPKKTIQVMENPNATPLH 689
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00296 689 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524
Gma13g00296 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 308 IPR003439 GO:0005524
Gma13g00296 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 689 - -
Gma13g00296 689 Gene3D - 62 316 IPR027417 -
Gma13g00296 689 Pfam ABC-2 type transporter 265 366 IPR043926 GO:0140359
Gma13g00296 689 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Gma13g00296 689 MobiDBLite consensus disorder prediction 1 21 - -
Gma13g00296 689 Pfam ABC-2 type transporter 387 598 IPR013525 GO:0016020|GO:0140359
Gma13g00296 689 SMART AAA_5 91 278 IPR003593 -
Gma13g00296 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 297 IPR027417 -
Gma13g00296 689 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 689 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma13g00296 Gma-Chr13 14382878 14386459 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00296 92 247 Calmodulin-binding Proteins AT2G36910 30.061 8.93e-10 60.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00296 K05681 - gmx:100785858 1248.42