Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00295 ATGGCTTGCAATATTCACGATGAATCTGTTTCATCTGCTGCTACATGTGCTTATGAAACCAAACCCCAGCAAAGTGGCATAGACATTGAAGCCACTACCCTAGAAATGGAAGCTTTTAGAGGTCCAAGAAAGATGAATGGAAGTGTGAGTGTGACTCAGAAAGACGAGATTGGTATGATCTGCATGACATGGAAGGATGTGTGGGTGACAGCTTCCAATAGAAAGAATGGCAGCAAATCAATTCTTCAAGGGCTAACTGGTTATGCTAAGCCAGGGCAACTCTTGGCAATAATGGGTCCCTCTGGCTGTGGCAAATCAACTCTACTTGATACTTTAGCAGGGAGATTAGGTTCAAACACAAGGCAAACCGGGGAGATTCTGATCAATGGTCACAAACAAGCACTGTCTTATGGAACCTCAGCATATGTCACACAAGATGATACATTACTCACCACCTTAACAGTTAGAGAAGCTGTGCACTATTCAGCTCAACTCCAATTACCAGACACCATGTCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGACGCCATTAACACAAGAATTGGAGGGTGGGGTTGTAAAGGAATCAGTGGGGGTCAGGAGAGAAGAGTTAGCATCTGCATCGAAATCCTAACACGCCCAAAACTTCTGTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAGAAGAATTGCTACCTTGGCTCAGAATGATCACATTCAGAGGACTGTTATTCTATCAATCCACCAGCCTAGTAGTGAAGTTTTTCAACTCTTCAATAGCCTTTGTCTTTTGTCTTCGGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAACAGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTGAAAACCATAAACAAGGATTTTGATCAGGATATTGAAGTGGGTTTAGCAGGAACTAAAAGCATGCCTACAGAAGAAGTAATCCACATCCTTTTGAACTCATACAAATCATCTGAAAGGAACCAAGAAGTTCAGAATGAAGTAGCTGTACTATCTAAGAAGGACACCAGTTCATTGGATATGAAGAGAGGGAATGCAGGCTTCCTAAATCAATGTTTAGTTCTTACCAAAAGATCGTTCATTAACATGTATCGTGATCTAGGCTATTATTGGTTACGCCTTGTCATATATATTGCATTGGCCATAACTTTAGCCACTGTTTTCTATGATTTGGGCACAAGTTATGACTCAATTAAGGATCGAGGTTCACTTGTTGCATTCATAAATGGATTCATTACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGTCATGAAGGTATATCAACGAGAAAGACAAAATGGGCATTATGGTGTGACTGCATTTGTCATTGGGAACACTTTGTCATCTATCCCATACTTGTTATTGGTTACATTCATTCCCGGGGCTATATCTTATTACCTTCCCGGTCTTCAGAAGGGATGCGAACACTTTCTGTATTTCATTTGTGTTTTATTTTCTAGTCTCATGTTAGTGGAGAGCCTTATGATGATAGTTGCGAGCGTTGTTCCCAACTATCTAATGGGCATCATAACTGGTTCTGGAATTCAAGGAATCATGCTTTTACTCTGTGGGTTCTTTAAATTGCCAAATCATATTCCTAAGCCAGTTTGGAAATACCCATTGCACTATGTTGCCTTTCATACGTATGCCAACCAAGGAATGTTCAAGAACGAGTATGAAGGACTAAGATTTGCTTCCAATGAAGTTGGAGGAGGTTACATAAGTGGTGAAGAGGTTTTAAGAAATACATGGCAAGTTGACACGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGATAGGGATGATTGTTGTGTATCGAGTTTTGTTTTTGGTTATCATCAAGATTAAAGAGAAGATGAAACCCGTTGTTGTATCACTATCGTGCATGTCAGCCTCTCCCAAGAGAACAATACAGGTCCTGGAAAACCCCAATGCCACTCCTTTACATTGA 2070 0.4058 MACNIHDESVSSAATCAYETKPQQSGIDIEATTLEMEAFRGPRKMNGSVSVTQKDEIGMICMTWKDVWVTASNRKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALSYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDTMSKEEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQERRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIATLAQNDHIQRTVILSIHQPSSEVFQLFNSLCLLSSGKTVYFGPASAATEFFASNGFPCPPLMNPSDHLLKTINKDFDQDIEVGLAGTKSMPTEEVIHILLNSYKSSERNQEVQNEVAVLSKKDTSSLDMKRGNAGFLNQCLVLTKRSFINMYRDLGYYWLRLVIYIALAITLATVFYDLGTSYDSIKDRGSLVAFINGFITFMTIGGFPSFVEVMKVYQRERQNGHYGVTAFVIGNTLSSIPYLLLVTFIPGAISYYLPGLQKGCEHFLYFICVLFSSLMLVESLMMIVASVVPNYLMGIITGSGIQGIMLLLCGFFKLPNHIPKPVWKYPLHYVAFHTYANQGMFKNEYEGLRFASNEVGGGYISGEEVLRNTWQVDTSYSKWVDLAILIGMIVVYRVLFLVIIKIKEKMKPVVVSLSCMSASPKRTIQVLENPNATPLH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00295 689 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Gma13g00295 689 Pfam ABC-2 type transporter 387 598 IPR013525 GO:0016020|GO:0140359
Gma13g00295 689 Gene3D - 62 312 IPR027417 -
Gma13g00295 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 308 IPR003439 GO:0005524
Gma13g00295 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 298 IPR027417 -
Gma13g00295 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 689 - -
Gma13g00295 689 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 689 - -
Gma13g00295 689 Pfam ABC-2 type transporter 265 372 IPR043926 GO:0140359
Gma13g00295 689 SMART AAA_5 91 334 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00295 Gma-Chr13 14368456 14373406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00295 92 269 Calmodulin-binding Proteins AT2G36910 28.649 1.50e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00295 K05681 - gmx:112998761 1259.97