Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00294 ATGAGTTTCAGCAGGCAATATTTTTATTTTGCAAACACAAGTTACATCAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTCTAGAGATGGCACCTGTGACATACATAGATTCTAGTGTTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGTTGTTCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAGGAGCATCTAACAGTCCACAAGCACCATTCTCTTCAGTAGAGAACAAACCAAGTTTGTTTGCACGATTATCAAAAGAGAGAGTGGAGAAGCTTTCAATTACCGACTTGGAGTCAGGGGCAGGGAAGGACATAGAAAGTGCTTATTGGGAATTGGTTGTGAAGGACATACAGGATACTTGCAAACTTCTGGAGCCAATTTACAATGAAACAGATGGGGAAGATGGACATGTATCTCTTGCAGTTTCCCCAAAGCTAGCAAATGACACCAATGGGACAATTGAGGCAGCAAAATGGCTTCATAATATGGTTGGAAGTCCGTGTGTTTACATGAAAATTCCTGCCACTGATGAATCCATCTCTTCCATGAAGGAGGTCATTTCTCTGGGGATAAGTGTAAATGCCACTGTTTCAAGTGTAACAACATTCTACATCAGTAGAGTGGATGTTACACTTGACAAGAAACTTGAGCAAATTGGTACTACTGAGGCTCTTGATCTCAAAGGAAAGGGTGCGGTTGCTCAAGCAGTCTTAGCATACCAACTTTACCAGAAAAAATTTTCTGGTCCAAGATGGGAACGCTTGGAGAATAGAGGTGCCAAGAAGCAGAGGTTGATGTGGGCTTCAACAAATGTGAAAAATCCATCTTACCCTGACACGTTTTATGTTAATTCTGTTATTGGACGAGATACAATTTCAACCTTTTCAGTACAAGCTCTTCAAGCATTCATGGACCATGGTATTCTTTCAAGAACGCTTGATGCAAAAGTATCAGAGGCTCAAGACATTTACAATGCAATTGAGAAGTTGGGGATTGATTGGAGTTCTGTTGGATTAGAATTGGAACATGAGGTGCTGGATTCTTTCACAAAAAGCTTTGACAATGTGCTTGAATGCATGCAAAAGAAGGCTATGAACATATATTCATTTCAAAAGCACGTTTAA 1305 0.4008 MSFSRQYFYFANTSYIKDRLREYEVDVDRSKRRGPEVERIYFVILEMAPVTYIDSSVVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDVVQVCLQHVQSLKGASNSPQAPFSSVENKPSLFARLSKERVEKLSITDLESGAGKDIESAYWELVVKDIQDTCKLLEPIYNETDGEDGHVSLAVSPKLANDTNGTIEAAKWLHNMVGSPCVYMKIPATDESISSMKEVISLGISVNATVSSVTTFYISRVDVTLDKKLEQIGTTEALDLKGKGAVAQAVLAYQLYQKKFSGPRWERLENRGAKKQRLMWASTNVKNPSYPDTFYVNSVIGRDTISTFSVQALQAFMDHGILSRTLDAKVSEAQDIYNAIEKLGIDWSSVGLELEHEVLDSFTKSFDNVLECMQKKAMNIYSFQKHV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00294 434 Pfam STAS domain 8 108 IPR002645 -
Gma13g00294 434 PANTHER TRANSALDOLASE 257 429 IPR001585 GO:0005975
Gma13g00294 434 CDD STAS_SulP_like_sulfate_transporter 8 106 - -
Gma13g00294 434 Gene3D STAS domain 4 120 IPR036513 -
Gma13g00294 434 PANTHER TRANSALDOLASE-RELATED 132 257 - -
Gma13g00294 434 SUPERFAMILY Aldolase 138 423 - -
Gma13g00294 434 Pfam Transaldolase/Fructose-6-phosphate aldolase 137 418 IPR001585 GO:0005975
Gma13g00294 434 PANTHER TRANSALDOLASE-RELATED 257 429 - -
Gma13g00294 434 Hamap Transaldolase [tal]. 153 430 IPR004732 GO:0004801|GO:0005737|GO:0006098
Gma13g00294 434 PANTHER TRANSALDOLASE 132 257 IPR001585 GO:0005975
Gma13g00294 434 Gene3D Aldolase class I 126 258 IPR013785 -
Gma13g00294 434 SUPERFAMILY SpoIIaa-like 8 111 IPR036513 -
Gma13g00294 434 Gene3D Aldolase class I 259 420 IPR013785 -
Gma13g00294 434 ProSiteProfiles STAS domain profile. 8 113 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00294 Gma-Chr13 14352387 14355169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00294 9 119 Inorganic Solute Cotransporters AT5G13550 75.676 1.49e-50 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00294 K00616 - gmx:106795612 528.48