Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00291 ATGAGCTGTCTTCTTCAACCTAATGCTAGTGATTGTGAACCAAACAATAGCTCTAAAATTCTGCCACCCCTTTCAGAATTTGAGACCTCATTTGAGGTAGAAAAGATCAAATCAGTAGAAACTGGTAAAGATGGCGAGGAAGATCAAGAGGAGGGTGTTTTCTTGACGTGGGAGGATTTGTGGGTGACAGTTTCAAATGGAAAAAATGGAAGGAAGCCAATACTTCAGGGTCTAAAAGGCTATGCCAAACCAGGGAAACTATTGGCAATAATGGGTCCTTCTGGTTGTGGCAAGTCAACACTTCTTGATGCTTTAGCAGGAAGATTAGGTTCAAAGACAAAGCAAACAGGGAAGATCTTAATCAATGGAAGGAAACAAGCACTAGCTTATGGAGCATCTGCATATGTAACAGAAGATGATACTATTTTGACAACTCTAACAGTCAAAGAAGCTGTATACTACTCAGCTTACCTTCAATTGCCAGATTCCATGTCCAAGTCAGAAAAACAGGAGAGAGCTGATTTCACAATAAGAGAAATGGGTCTGCATGATGCCATTAACACCAGAATTGGAGGGTGGGGTTCTAAAGGCGCTAGTGGCGGGCAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCAAGGCTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGCGCAGCTTCTTATCATGTTATGAGTAGAATATCCAACTTGAACAAAAAGGATGGCATTCAAAGGACTATTATTGCATCAATCCATCAGCCAAGTAATGAAATTTTTCAACTTTTCCACAACCTTTGCCTTCTGTCTTCTGGGAAAACAGTTTACTTTGGACCTACTTCTGCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCCCTGCCCAAGTCTTCATAGTCCTTCAGATCACTTCGTAAAAACCATTAACAAGGATTTTGAACAGGACCCTGAGAAAGGATTAGCCGGAGGGCTAAGTACAGAAGAAGCAATTCATGTTCTTGCTAAATCATATGATTCATCTAAGATTTGTCACCAAGTTCAAAAGGAAATAGCCCAAACAAAGAAAAGGGACTCGGACACAATGGATGAGAAATGCCATGCTGACTTTTTCACCCAATGTCTCATTCTTACAAGAAGATCTTTCGTGAACATGTATCGCGAAGTAGGTTATTACTGGTTACGCCTACTTATCTATGGTGCCTTGGCTTTAAGTCTTGGTACCATGTTCTTTGACATTGGTTCAAGCAGTGAATCAATTCAGGCCAGAGGTTCATTGCTTGTGTTTGTTGTTACATTCCTGACCTTCATAACTGTTGGAGGGTTCCCTTCTTTTGTGGAGGAAATGAAGGTGTTTGAAAGAGAAAGACTCAATGGGCATTATGGTGTCACTGCATTTACCATCGGCAACACATTATCCTCTGTTCCATTTTTGCTGTTGATGTCATTGATCCCAGGAGCACTGGTTTATTACCTAGTTGGACTTCACCAAGGACACGAACATTTTGTGTACTTTATATTTATGCTTTTCACTTCAGTCTTCTTGGTCGAGGGTCTCATGATGATTGTTGCGAGCATGGTTCCCAATTTCTTGATGGGTATAATCGTTGGTTCTGGAATTCTGGGCATAATGATGTTAGATGGTGGATTCTATAGGCTTCCAAGTGACATTCCTAAGCCCTTTTGGAGATACCCTTTGCACTACATTTCCTTCCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAGTTTCAAGGTCTAACATTCCCTAGCAATCAAGTTGGAGCACACATGACAATTCATGGTGAACATATTCTGAGACACATATGGCAAATGGAAGTGAATTATTCAAAGTGGGTGGATGTTGGTATCTTGGTAGGAATGGCAGTACTATATCGAATTCTATTTTTGGTTATCATCAAGAGCTTTGAGAAGGTGAAGCCTATTTCCTCAGCATTAAATTGTCCCCAAACAAACTTTGGGTTAACCAAAGTGACAAGGAGCAGTGAGATTGATTAG 2031 0.4042 MSCLLQPNASDCEPNNSSKILPPLSEFETSFEVEKIKSVETGKDGEEDQEEGVFLTWEDLWVTVSNGKNGRKPILQGLKGYAKPGKLLAIMGPSGCGKSTLLDALAGRLGSKTKQTGKILINGRKQALAYGASAYVTEDDTILTTLTVKEAVYYSAYLQLPDSMSKSEKQERADFTIREMGLHDAINTRIGGWGSKGASGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYHVMSRISNLNKKDGIQRTIIASIHQPSNEIFQLFHNLCLLSSGKTVYFGPTSAANKFFSSNGFPCPSLHSPSDHFVKTINKDFEQDPEKGLAGGLSTEEAIHVLAKSYDSSKICHQVQKEIAQTKKRDSDTMDEKCHADFFTQCLILTRRSFVNMYREVGYYWLRLLIYGALALSLGTMFFDIGSSSESIQARGSLLVFVVTFLTFITVGGFPSFVEEMKVFERERLNGHYGVTAFTIGNTLSSVPFLLLMSLIPGALVYYLVGLHQGHEHFVYFIFMLFTSVFLVEGLMMIVASMVPNFLMGIIVGSGILGIMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLTFPSNQVGAHMTIHGEHILRHIWQMEVNYSKWVDVGILVGMAVLYRILFLVIIKSFEKVKPISSALNCPQTNFGLTKVTRSSEID 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00291 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 301 IPR003439 GO:0005524
Gma13g00291 676 SMART AAA_5 84 273 IPR003593 -
Gma13g00291 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 291 IPR027417 -
Gma13g00291 676 Pfam ABC-2 type transporter 258 358 IPR043926 GO:0140359
Gma13g00291 676 PANTHER - 24 657 - -
Gma13g00291 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 24 657 - -
Gma13g00291 676 MobiDBLite consensus disorder prediction 1 23 - -
Gma13g00291 676 Pfam ABC-2 type transporter 376 588 IPR013525 GO:0016020|GO:0140359
Gma13g00291 676 Gene3D - 41 295 IPR027417 -
Gma13g00291 676 Pfam ABC transporter 77 226 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00291 Gma-Chr13 14325434 14329130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00291 74 286 Calmodulin-binding Proteins AT2G36910 27.189 6.66e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00291 K05681 - gmx:100789571 1341.25