Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00289 ATGATGACTTCCATTCTCTGTCATCCTCTCAGAACTAAAGATAGTTATTATGATGAAGCTTATGATGGTTCAATACAAGGACAAAGTGACTTAGAGCTTGGCGCCAATTTGGCCAAATGTTCAGAGGAGAGATGCAGATCGAGGAGAAGTTGTTCTAAATGTAGTAGCAGAGCAATTTTGACCACATTTGAAGGTGATGCCATCAAGTTAACAGAAATCAATGGAAGTGTTCAAAGAGAGAAGGACATAACAGTGACATGGGAGAATTTGTGGGTCACTGTTTCAAGTGGGAAGAAAAAAAAGCCAATTCTGCAGGATCTTACAGGTTATGCCCGGCCAGGAAGGATTCTGGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGAAGATTGAGCACAAACATAAAGCATACAGGGAAGATTCTAATCAATGGCCAGAAACAAGCACTGGCCTATGGAACATCAGGCTATGTAACACAAGATGATGCCATGCTATCAACTTTAACCACTGGGGAAACTTTATACTACTCAGCTCAGCTCCAATTTCCAGATTCCATGTCCATAGCAGAGAAGAAGGAACGAGCAGATATGACACTGAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATTGAGATTCTAACACGCCCGAGACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTAGAATTGCAAGTCTAAATCTAAGGGACGGAATTCGAAGGACTATTGTTGCATCCATCCATCAGCCTAGCAGTGAAATTTTTGAACTTTTCCATGACCTATGTCTTCTGTCTTCTGGTGAAACAGTATATTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCTTGCCCGACTCTCCACAATCCTTCTGATCACTACCTAAGGATCATAAACAAAGATTTTGAACAGGATGCTGAACAAGGCTTTGGAAAGGGAGTAATTTCAGAAAAAGCAATTGATAACCTTGTAAAGTCTTACAAGTCGTCTCAAATTAGAAAACAAGTTAAAAAGGAAGTGAATAAAATAGGTGAAAGTGATTCTGATGCAATAAGGAAGCAGAGGATTCATGCTGCATTTCCCACTCAATGCCTTGTTCTTATAAGAAGAGCTTCCTTGCAGCTGTTTCGTGACATAAGCAATTACTGGTTACGGTTAATTGTCTTTATTGTAATAGCTATAAGCATTGGCTCTATCTTCTATGACATAGGCACAAGTAATGGATCTATTCAGGGGAGAGGTTCGCTGTTCATATTTTTTGTTTCAGTTCTGACTTTCATGACCCTTGTTGGTGGATTTTCTCCACTTTTGGAAGAAATCAAGGTATTTGAACGAGAGAGATTGAATGGGCACTATGGTGTCACGGCATTTCTCATAGGCAACATATTCTCTGCTGTTCCTTACATGCTATTGATATCTCTTATTCCTGGAGGAATAGCATACTACCTTTGTGGAATGCACAAAGGACCAGAACGCTTCTTCTACTTCACTTCTTTGTTATTTGCCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTTGTTGGGAGTATCTGCCCCAACTATGTAATAGGTATGTTCCTTGCTGGTGGAGTTGAAGGGCTCATGATTTTAACTGGTGGATTCTATAGACTGCCAAATGATCTTCCCAAACCACTATGGAAGTACCCTTTATACTATGTTTCCTTCCTCAAATATGCCTTCCAAGGATCCTTCAAGAATGACTTTGAAGGCTTAACATTTTCTGTAGACCAAGATGGAGGAGTCACCAGAACCGTGAGTGGTAGAGAAGTACTAAGTGACACATGGCATCTGGAAATGGGTTACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTCTTCTGTATCGAGTTTTGTTCTTGGTCATCACTAAGTGCAAGGAGAAGCTGAAGCCTTTTCACTAG 2061 0.4105 MMTSILCHPLRTKDSYYDEAYDGSIQGQSDLELGANLAKCSEERCRSRRSCSKCSSRAILTTFEGDAIKLTEINGSVQREKDITVTWENLWVTVSSGKKKKPILQDLTGYARPGRILAIMGPSGCGKSTLLDALAGRLSTNIKHTGKILINGQKQALAYGTSGYVTQDDAMLSTLTTGETLYYSAQLQFPDSMSIAEKKERADMTLREMGLQDAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIRRTIVASIHQPSSEIFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEQGFGKGVISEKAIDNLVKSYKSSQIRKQVKKEVNKIGESDSDAIRKQRIHAAFPTQCLVLIRRASLQLFRDISNYWLRLIVFIVIAISIGSIFYDIGTSNGSIQGRGSLFIFFVSVLTFMTLVGGFSPLLEEIKVFERERLNGHYGVTAFLIGNIFSAVPYMLLISLIPGGIAYYLCGMHKGPERFFYFTSLLFAIVMWVESLMLVVGSICPNYVIGMFLAGGVEGLMILTGGFYRLPNDLPKPLWKYPLYYVSFLKYAFQGSFKNDFEGLTFSVDQDGGVTRTVSGREVLSDTWHLEMGYSKWVDLAIMFGMILLYRVLFLVITKCKEKLKPFH 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00289 686 CDD ABCG_EPDR 83 312 - -
Gma13g00289 686 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524
Gma13g00289 686 Pfam ABC transporter 104 255 IPR003439 GO:0005524
Gma13g00289 686 Pfam ABC-2 type transporter 287 346 IPR043926 GO:0140359
Gma13g00289 686 Gene3D - 83 411 IPR027417 -
Gma13g00289 686 Pfam ABC-2 type transporter 406 617 IPR013525 GO:0016020|GO:0140359
Gma13g00289 686 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 686 - -
Gma13g00289 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 686 - -
Gma13g00289 686 SMART AAA_5 113 306 IPR003593 -
Gma13g00289 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 321 IPR027417 -
Gma13g00289 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 330 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00289 Gma-Chr13 14303669 14311869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00289 103 265 Calmodulin-binding Proteins AT2G36910 32.353 1.94e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00289 K05681 - gmx:100790102 1246.88