Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00266 ATGAAATCAAAAAACAATACTTCTCTTTCGCCTAAAGTCATTTCCATATTGATGACGGATCAATATGCTACAGACTCATCCAGCGACGAAGAAAGAGTCACGAGCCGCCGGCGCATCAAGCGTTATGTCAATAGAATCGAGCTTCAGCCGGCGATTAAATCCGTCGCTACCAGAAAGAGACACGTTGGAGACGCCACGAAACTACGGCCGCCGCAGGTGAAGGTGAAGAATTCTGGCAGCGTGAAAAAATTCCGCGGTGTGAGGCAACGCCCGTGGGGTAAATGGGCGGCGGAGATACGGGATCCTGTGCAGCGCGTGAGAATCTGGCTGGGAACCTTCGAAACCGCGGAGGAGGCCGCCTTGTGTTACGACAATGCCGCAATCATGCTCCGCGGCCCGGACGCCCTAACGAATTTCGGGATACGGTCAAAGGAAACGTTGGAGAAAGAAGAAAGAAAAGAGTTGGATGAAAAGGAAGAAATCAGAACCGAAAAACCGGAAATGAAGGTGGTCGTGAAACCGGAGATTGAAACTGCTTTGGTCTCCTGCTTCTACGACTCGGCGGACGAGTTTTGTCTGAACCTCTCGTCACCCACTTCAGTTCTCCGGTTCAACGAATCAGCTGAACTGGAGAAACAGTACGAGCCGTTTCCCGGTCGAACCGAAGCCCACACCGTGCTGGAAGAGTGTCAAGGACAAACTGTGTCGTTTCATGAAAGTAGTGAGTTTATGTTACAAGACATGCCGTGGGATGATGTGTTTAATTTTCCGGTAATGTTCGACGAGCCGGTGTCGCACTTGTTTGACGAAACGACGCGGTTTTCGAGTAGTGAGGTTTTCAGTGAGGAAAAGTTTTTGCCGTCAGCAACGTTGTGCCAAGTGGACGATTATTTCCAAGACATTTTGTTAGGGTCAGATCCTCTGGTGGCTCTGTGA 936 0.5011 MKSKNNTSLSPKVISILMTDQYATDSSSDEERVTSRRRIKRYVNRIELQPAIKSVATRKRHVGDATKLRPPQVKVKNSGSVKKFRGVRQRPWGKWAAEIRDPVQRVRIWLGTFETAEEAALCYDNAAIMLRGPDALTNFGIRSKETLEKEERKELDEKEEIRTEKPEMKVVVKPEIETALVSCFYDSADEFCLNLSSPTSVLRFNESAELEKQYEPFPGRTEAHTVLEECQGQTVSFHESSEFMLQDMPWDDVFNFPVMFDEPVSHLFDETTRFSSSEVFSEEKFLPSATLCQVDDYFQDILLGSDPLVAL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00266 311 SUPERFAMILY DNA-binding domain 83 141 IPR016177 GO:0003677
Gma13g00266 311 CDD AP2 82 139 IPR001471 GO:0003700|GO:0006355
Gma13g00266 311 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Gma13g00266 311 Coils Coil 144 164 - -
Gma13g00266 311 Pfam AP2 domain 83 132 IPR001471 GO:0003700|GO:0006355
Gma13g00266 311 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 6 306 - -
Gma13g00266 311 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 306 - -
Gma13g00266 311 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
Gma13g00266 311 Gene3D AP2/ERF domain 82 142 IPR036955 GO:0003700|GO:0006355
Gma13g00266 311 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Gma13g00266 311 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00266 Gma-Chr13 13530998 13531933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00266 1 204 AP2-EREBP Transcription Factor Family AT4G27950 46.009 2.94e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma13g00266 AP2 7.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00266 - - gmx:100801199 595.119