Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00263 ATGGCTTCACATTGCTTCCTTCTTTTTCTTCCTTCCTCTTTTTCCTTAAACCCCAAATCCAAAAGGCTTCCAAAACCTCGTTATCACCCTTCCATTTTCTCACGAATTCAAACCCCAAAACCCGACGATGACGACAAAATCCCAAACAACAACCACTTTGACTTTCTCAAACTCTCCGTCACCCTCACCGTCATCTCCACCTCCCTCCCCAAACTTGTCGCCGCTGCCACCACTAAGGGCCGCTACGCCGCCGACATCCGCAACCTCAACAAGAAAACGCGCGTCTGGCTCGTTACCTTTGACACCGCCGAGGAAGTTGCTCGCGCATACGACACCGCTGCACAAGTGGTCTTCGCAACCATAACCAGGAATCTCGAGTTTAGGTTCGAGCCTAATGGCAGCGCTATGGACTCTTTGATTTGCTTCGCGTTGCAATCGAAGTCCATCGCCCATTGGTTCAAATTGCATGTGGCAACCTTCAATAGCCTCATGGCTGCTTCAAAGGACTCCATCTCTGAAGTTCACCGCTTTGCCTTGTTCCACTTGGTTGAAGACTCAGATGCTAATGATGATTACCATAGACCTATCAATGTGGTGTATGGCAAGAGATCAAGGAAAGAAGAAGGGAAAAATCTAGTTGATGCACCAATGGCAAAGAAGCAGGTGACTCTCTTTGATTCTAAGGTTCCTAAACATCCAATGGTGAAGCATGCTGTTCATAGGACTAAAGGTCCATTTCAGAAAGTTACAGTGGAGAAGGCACCTGTTAAGGAAGCACTTGTGCCTAAGAGAAGGGTGATAAAAAATCTATCCATACCACTAAGAAACTGGATGATGATTCAACACCTCCATCACCTCTCAAAGAACTTGTATGGCTTCTACAAGTGGAGATGCTACTGCACCATTTCCAAAAACCACAAGGCTCATGGTAGAGATGATTAA 942 0.4639 MASHCFLLFLPSSFSLNPKSKRLPKPRYHPSIFSRIQTPKPDDDDKIPNNNHFDFLKLSVTLTVISTSLPKLVAAATTKGRYAADIRNLNKKTRVWLVTFDTAEEVARAYDTAAQVVFATITRNLEFRFEPNGSAMDSLICFALQSKSIAHWFKLHVATFNSLMAASKDSISEVHRFALFHLVEDSDANDDYHRPINVVYGKRSRKEEGKNLVDAPMAKKQVTLFDSKVPKHPMVKHAVHRTKGPFQKVTVEKAPVKEALVPKRRVIKNLSIPLRNWMMIQHLHHLSKNLYGFYKWRCYCTISKNHKAHGRDD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00263 313 Gene3D AP2/ERF domain 73 128 IPR036955 GO:0003700|GO:0006355
Gma13g00263 313 SUPERFAMILY DNA-binding domain 78 121 IPR016177 GO:0003677
Gma13g00263 313 ProSiteProfiles AP2/ERF domain profile. 69 128 IPR001471 GO:0003700|GO:0006355
Gma13g00263 313 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 78 117 - -
Gma13g00263 313 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 78 117 - -
Gma13g00263 313 SMART rav1_2 79 132 IPR001471 GO:0003700|GO:0006355
Gma13g00263 313 CDD AP2 80 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00263 Gma-Chr13 13189917 13197673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00263 80 115 AP2-EREBP Transcription Factor Family AT3G15210 80.556 1.13e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma13g00263 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00263 K09286 - gmx:100787999 127.487