Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00258 ATGAAGTATAGCCCCACAGATTTCCAGAGACCAGAACTTTTAAATAAGAATTTAATAAAGGGCAATATTCTTCTCTGTGGATATTCCTTCAACTTTGTTGTTGGCATTGCATCGATCAAGAAAGTCTCAGAAACAACAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACATTTCCGCAGGAACAAAATTTGATCGAGTTCCTGTTGGCCTTCCTAGGATTCTCATCATAGATGTTAGCAATTCAAAGGTAGCATTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAAGGGTTTGCCATAATATCTGGAACCAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCTCATTGGAGCCCTGTAGCCATTAAATCAGCTTTGATGACTACATCAACGACTCTACATGATATACTATATCTGTTAGATAGGGCACTATAA 579 0.4024 MKYSPTDFQRPELLNKNLIKGNILLCGYSFNFVVGIASIKKVSETTKALGAVGFVLCVENISAGTKFDRVPVGLPRILIIDVSNSKVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAIISGTSMAAPHIAGIAALIKQKHPHWSPVAIKSALMTTSTTLHDILYLLDRAL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00258 192 ProSiteProfiles Serine proteases, subtilase domain profile. 1 192 - -
Gma13g00258 192 SUPERFAMILY Subtilisin-like 81 183 IPR036852 GO:0004252|GO:0006508
Gma13g00258 192 ProSitePatterns Serine proteases, subtilase family, serine active site. 143 153 IPR023828 -
Gma13g00258 192 Gene3D Peptidase S8/S53 domain 81 182 IPR036852 GO:0004252|GO:0006508
Gma13g00258 192 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 180 IPR045051 -
Gma13g00258 192 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 86 IPR045051 -
Gma13g00258 192 PANTHER CUCUMISIN-RELATED 83 180 - -
Gma13g00258 192 PANTHER CUCUMISIN-RELATED 4 86 - -
Gma13g00258 192 Pfam Subtilase family 32 183 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00258 Gma-Chr13 12932710 12934769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00258 2 188 Subtilisin-like Serine Gene Family AT2G19170 64.912 2.98e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00258 - - gmx:100776104 319.316