Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00245 ATGCCTCAGCTGCAGAGGAGAAACACGCGTACTCGTTGGACCGAAGAGGAACACAGGTTATTTCTTATTGAGATGGAGAGATTTGGTAAAAGTAATTGGACAAACATTGCACAACATGTTGTGTTGACAAAAACTCCCTCCCAAGTTGCTAGCCACGCCCAAAAGTTTTTCCTCCACCATAGTAGTGTCAAACAAAGCAAAAGACAGAGGAAAAACCCCAGCATACACGACATAACCCTGGTCTCACAACCAGTTTCCCAACACAACCCAGTAAATGATCAATTAGCAGAGAAACTGCATGTGGTTCCCTCACAACAATTGACAGACTTTGAAGGTTGCTTGGCAATTCACCTCAATGACCAGCTGAGTAGGCCTCCCTCAACAATGGcacaagatctgcaaattcagcaattgcctcacttcgttgaccatgatagctgggtttcaactccaaatcaacagTCTAATCTGCTGATACTTCAACATGGTCAGAAGTGGAAAGGCCCTGACGATAAGAGCTCAGTTATAACTCCTGAACTGTTTCCTAAGTTGCTGAAGGATCACTTATTCTTATTCTTGACTCACGATTCTACTCCGAGTCCGTGGGTTTACGAAAACCCGAAACGGTGTCGTGCTGGTGCAAACCTACTCACTTACGAAGTGACTCTATCTACTCACTCTGCCTTGTTGAAGTTTGGTTTGGGTGCTGAGCTACTCGTGTCGGCGTCACAGTGGTCTTCATCATTGCTGGCCCTCACTCGCGACTCTGTCTGA 774 0.416 MPQLQRRNTRTRWTEEEHRLFLIEMERFGKSNWTNIAQHVVLTKTPSQVASHAQKFFLHHSSVKQSKRQRKNPSIHDITLVSQPVSQHNPVNDQLAEKLHVVPSQQLTDFEGCLAIHLNDQLSRPPSTMAQDLQIQQLPHFVDHDSWVSTPNQQSNLLILQHGQKWKGPDDKSSVITPELFPKLLKDHLFLFLTHDSTPSPWVYENPKRCRAGANLLTYEVTLSTHSALLKFGLGAELLVSASQWSSSLLALTRDSV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00245 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Gma13g00245 257 CDD SANT 12 57 IPR001005 -
Gma13g00245 257 Gene3D - 11 63 - -
Gma13g00245 257 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 8 59 IPR006447 GO:0003677
Gma13g00245 257 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 4 174 - -
Gma13g00245 257 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Gma13g00245 257 SUPERFAMILY Homeodomain-like 6 62 IPR009057 -
Gma13g00245 257 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 174 - -
Gma13g00245 257 Pfam Myb-like DNA-binding domain 10 55 IPR001005 -
Gma13g00245 257 SMART sant 9 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00245 Gma-Chr13 12456586 12465008 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma13g00245 Myb_DNA-binding 8.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00245 - - gmx:102664863 310.071