Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00240 ATGGTGCCTCCTGGGCCACCCACGCCGATTGGTGGTGCTCAGTCTGTGCCGCTGTCGCTTTTGAGATCAAATTCGGGAATGTTGGCGGGTCAAGGGGGGGGAGCTGTGCCTTCACAAACCTCGTTCCCTTCGCTGGTGGGACAGCGAAACCAGTTTAACAACATGAATATGCTAGGGAACATGTCTAATGTGACTTCCTTGCTGAATCAGTCTTTCCCGAATGGAATTCCAAATTCAGGGCTTGGTGGCCCTGGGAGCAGCCAGCGCAGTGGAGGGATTGATGCTGGGGCAGAGGCGGATCCGCTATCTGGTGTTGGCAATGGAATGAATTTTGGCAATCAGTTGCAATCAAATTTGATGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCCACAATTTTCAAATGCTTCTGGTAGCCAGATGTTGCAAGATcagcagcattcgcagcaacttcctcagaatttccaacaacatagtcagccgtcaatgcaacagttctctggtcctctgaacgctcaacagcaacagcagcagcagcagcattttcagtccattcgaggtgggatgggtggtgttgggcaggtgaagttggagccacaggtaaacatcgatcagtttgggcagcagcagcagttgccgtcgaggaatcttgctcaggtgaagttggaaccgcagcaacttcaaacattgagaaatatggcaccggtgaaaatggagccccagcataatgatcagcaatttttgcaccagcaacaacaacagcagcagcagcagcaacaacaacaacaacagcaacaactgctccacatgtcaaggcaatcctctcaggctgctgctgctcagatgaatcatcttttgcagcagcagagacttttgcaatatcaacaacatcagcagcagcagcagcaactcttgaaggcaatgcctcaacaacggtcccagctaccacagcagtttcaacagcaaaatatgcctaTGAGGTCTCCTGTGAAACCAGCATATGAACCCGGGATGTGTGCCAGGCGGTTGACACATTACATGTATCAGCAACAACATAGACCTGATGATAACAATATCGAATTCTGGAGGAAATTTGTTTCTGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAATGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGGCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAATATGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGGGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTAAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAACTTGGAGCAGTTGCTCAAAAATACCAGGCAATAACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAGAATAATTGCAATATGGTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATACGTGCGGTGCCTTCAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCCATGGATAGCTTAGCTAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGGACAACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCACAACTGCCACCCCAGCATATGGTGCCTCATTCTTCAAACGGTGATCAAAACTCTGTGCAAACTGCTGCTATGCAAATTGCTTCTAGCAATGGTGTGACAAGTGTAAATAATTCCGTCAATGCAGCATCTGCATCAACCTCCACAAGCACCATTGTTGGACTTCTTCACCAGaattccatgaattctagacaaaattccatgaattctagacaaaattccatgaaCAATGCAAGCAGCCCTTATGGAGGTAGTTCTGTTCAAATTGCATCCCCGGGTTCCTCTGGTAACATGCCACAAGCACAGCCAAATGCATCTCCTTTTCAATCACCAACACCATCCTCATCTAACATCCCACAAACATCTCACCCTGCCTTAACTTCAGCAAACCACATGGGTACAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAACAACAAACATCTCTTCCTGCTGAAGCTGACCCTAGCGATGCCCAGAGCTCGGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAATGGGCCTGGTGGAATGGCTGGTGCTGGTTCGCTTGGAAATGACATGAAGAATGTAAACGGGATTCTACCAGGGAGTAACAATACAGGGCTCAACAGTGGCAGTGTCAGTGGCCTGGTGGGTAATGTGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATTGGTCTTGGTCCAGCTGGTATGACTAATGGAATGAGACCTGTAATGGGACATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCGCGTGATCAAGTTATGAATCATCAGCAGGATCTGTCAAGCCAACTACTTAGTGGGCTAGGAGGAGTAAATGGCTTCAGTAATCTTCAATTTGATTGGAAACCGTCTCCATGA 2787 0.3588 MVPPGPPTPIGGAQSVPLSLLRSNSGMLAGQGGGAVPSQTSFPSLVGQRNQFNNMNMLGNMSNVTSLLNQSFPNGIPNSGLGGPGSSQRSGGIDAGAEADPLSGVGNGMNFGNQLQSNLMNPGSSGQGQGPQFSNASGSQMLQDQQHSQQLPQNFQQHSQPSMQQFSGPLNAQQQQQQQQHFQSIRGGMGGVGQVKLEPQVNIDQFGQQQQLPSRNLAQVKLEPQQLQTLRNMAPVKMEPQHNDQQFLHQQQQQQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPDDNNIEFWRKFVSEYFAPNAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAITQNATPNLSVPELQNNCNMVVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQGQQSEDQLQQQSQPQLPPQHMVPHSSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASTSTSTIVGLLHQNSMNSRQNSMNSRQNSMNNASSPYGGSSVQIASPGSSGNMPQAQPNASPFQSPTPSSSNIPQTSHPALTSANHMGTANSPANISLQQQQQTSLPAEADPSDAQSSVQKIIHEMMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGSNNTGLNSGSVSGLVGNVAVNSNSGVGVGGYGTIGLGPAGMTNGMRPVMGHNSIMNGRGGMASLARDQVMNHQQDLSSQLLSGLGGVNGFSNLQFDWKPSP 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00240 928 MobiDBLite consensus disorder prediction 243 280 - -
Gma13g00240 928 MobiDBLite consensus disorder prediction 107 185 - -
Gma13g00240 928 MobiDBLite consensus disorder prediction 688 788 - -
Gma13g00240 928 Pfam LIM-domain binding protein 342 596 IPR029005 -
Gma13g00240 928 MobiDBLite consensus disorder prediction 586 643 - -
Gma13g00240 928 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 927 - -
Gma13g00240 928 MobiDBLite consensus disorder prediction 241 280 - -
Gma13g00240 928 MobiDBLite consensus disorder prediction 303 328 - -
Gma13g00240 928 PANTHER LIM DOMAIN-BINDING PROTEIN 1 927 IPR029005 -
Gma13g00240 928 MobiDBLite consensus disorder prediction 600 643 - -
Gma13g00240 928 MobiDBLite consensus disorder prediction 303 327 - -
Gma13g00240 928 MobiDBLite consensus disorder prediction 75 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00240 Gma-Chr13 12334749 12345575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00240 1 924 C2H2 Transcription Factor Family AT1G43850 58.412 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00240 - - gmx:100787437 1551.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00240 13 12334749 12345575 Gma13g00240 13 12334749 12345575 ECH