Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma13g00240 | ATGGTGCCTCCTGGGCCACCCACGCCGATTGGTGGTGCTCAGTCTGTGCCGCTGTCGCTTTTGAGATCAAATTCGGGAATGTTGGCGGGTCAAGGGGGGGGAGCTGTGCCTTCACAAACCTCGTTCCCTTCGCTGGTGGGACAGCGAAACCAGTTTAACAACATGAATATGCTAGGGAACATGTCTAATGTGACTTCCTTGCTGAATCAGTCTTTCCCGAATGGAATTCCAAATTCAGGGCTTGGTGGCCCTGGGAGCAGCCAGCGCAGTGGAGGGATTGATGCTGGGGCAGAGGCGGATCCGCTATCTGGTGTTGGCAATGGAATGAATTTTGGCAATCAGTTGCAATCAAATTTGATGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCCACAATTTTCAAATGCTTCTGGTAGCCAGATGTTGCAAGATcagcagcattcgcagcaacttcctcagaatttccaacaacatagtcagccgtcaatgcaacagttctctggtcctctgaacgctcaacagcaacagcagcagcagcagcattttcagtccattcgaggtgggatgggtggtgttgggcaggtgaagttggagccacaggtaaacatcgatcagtttgggcagcagcagcagttgccgtcgaggaatcttgctcaggtgaagttggaaccgcagcaacttcaaacattgagaaatatggcaccggtgaaaatggagccccagcataatgatcagcaatttttgcaccagcaacaacaacagcagcagcagcagcaacaacaacaacaacagcaacaactgctccacatgtcaaggcaatcctctcaggctgctgctgctcagatgaatcatcttttgcagcagcagagacttttgcaatatcaacaacatcagcagcagcagcagcaactcttgaaggcaatgcctcaacaacggtcccagctaccacagcagtttcaacagcaaaatatgcctaTGAGGTCTCCTGTGAAACCAGCATATGAACCCGGGATGTGTGCCAGGCGGTTGACACATTACATGTATCAGCAACAACATAGACCTGATGATAACAATATCGAATTCTGGAGGAAATTTGTTTCTGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAATGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGGCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAATATGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGGGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTAAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAACTTGGAGCAGTTGCTCAAAAATACCAGGCAATAACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAGAATAATTGCAATATGGTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATACGTGCGGTGCCTTCAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCCATGGATAGCTTAGCTAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGGACAACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCACAACTGCCACCCCAGCATATGGTGCCTCATTCTTCAAACGGTGATCAAAACTCTGTGCAAACTGCTGCTATGCAAATTGCTTCTAGCAATGGTGTGACAAGTGTAAATAATTCCGTCAATGCAGCATCTGCATCAACCTCCACAAGCACCATTGTTGGACTTCTTCACCAGaattccatgaattctagacaaaattccatgaattctagacaaaattccatgaaCAATGCAAGCAGCCCTTATGGAGGTAGTTCTGTTCAAATTGCATCCCCGGGTTCCTCTGGTAACATGCCACAAGCACAGCCAAATGCATCTCCTTTTCAATCACCAACACCATCCTCATCTAACATCCCACAAACATCTCACCCTGCCTTAACTTCAGCAAACCACATGGGTACAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAACAACAAACATCTCTTCCTGCTGAAGCTGACCCTAGCGATGCCCAGAGCTCGGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAATGGGCCTGGTGGAATGGCTGGTGCTGGTTCGCTTGGAAATGACATGAAGAATGTAAACGGGATTCTACCAGGGAGTAACAATACAGGGCTCAACAGTGGCAGTGTCAGTGGCCTGGTGGGTAATGTGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATTGGTCTTGGTCCAGCTGGTATGACTAATGGAATGAGACCTGTAATGGGACATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCGCGTGATCAAGTTATGAATCATCAGCAGGATCTGTCAAGCCAACTACTTAGTGGGCTAGGAGGAGTAAATGGCTTCAGTAATCTTCAATTTGATTGGAAACCGTCTCCATGA | 2787 | 0.3588 | MVPPGPPTPIGGAQSVPLSLLRSNSGMLAGQGGGAVPSQTSFPSLVGQRNQFNNMNMLGNMSNVTSLLNQSFPNGIPNSGLGGPGSSQRSGGIDAGAEADPLSGVGNGMNFGNQLQSNLMNPGSSGQGQGPQFSNASGSQMLQDQQHSQQLPQNFQQHSQPSMQQFSGPLNAQQQQQQQQHFQSIRGGMGGVGQVKLEPQVNIDQFGQQQQLPSRNLAQVKLEPQQLQTLRNMAPVKMEPQHNDQQFLHQQQQQQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPDDNNIEFWRKFVSEYFAPNAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAITQNATPNLSVPELQNNCNMVVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQGQQSEDQLQQQSQPQLPPQHMVPHSSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASTSTSTIVGLLHQNSMNSRQNSMNSRQNSMNNASSPYGGSSVQIASPGSSGNMPQAQPNASPFQSPTPSSSNIPQTSHPALTSANHMGTANSPANISLQQQQQTSLPAEADPSDAQSSVQKIIHEMMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGSNNTGLNSGSVSGLVGNVAVNSNSGVGVGGYGTIGLGPAGMTNGMRPVMGHNSIMNGRGGMASLARDQVMNHQQDLSSQLLSGLGGVNGFSNLQFDWKPSP | 928 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 243 | 280 | - | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 107 | 185 | - | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 688 | 788 | - | - | |
Gma13g00240 | 928 | Pfam | LIM-domain binding protein | 342 | 596 | IPR029005 | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 586 | 643 | - | - | |
Gma13g00240 | 928 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 1 | 927 | - | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 241 | 280 | - | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 303 | 328 | - | - | |
Gma13g00240 | 928 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 927 | IPR029005 | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 600 | 643 | - | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 303 | 327 | - | - | |
Gma13g00240 | 928 | MobiDBLite | consensus disorder prediction | 75 | 193 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma13g00240 | Gma-Chr13 | 12334749 | 12345575 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma13g00240 | 1 | 924 | C2H2 Transcription Factor Family | AT1G43850 | 58.412 | 0.0 | 740 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma13g00240 | - | - | gmx:100787437 | 1551.18 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g00240 | 13 | 12334749 | 12345575 | Gma13g00240 | 13 | 12334749 | 12345575 | ECH |