Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00238 ATGTCGTCACACACGTCGTTCGAGGTTCTGGTGGCCCACATGTGGAGGAGTTGGGCGAGGGTGATGGGGTTTCTTCCTAAAAACCAGACGCTGAAGCTTTTGTTTAGCGTGAACATGCGGAAGCGCGTGAATCCAGGACTACCAGAGGGGTATTGTGGGAATGCGCACAAACAAGCGCGTGGGAGTTGGGGGAGAGAGGGGTCAGGTACGGGTCGGTGGTCGAGGCTGGGTCTTGAGAGGGTTGAACTTAGGATGGGGAAGCCTCTGCATGTGGGGCCCATATGTTGTGATAGGTACTGCTTGTTTCTTCCGGTGACCGGTGAACGGCCGAGTGTGAAGCCTTGCTTAGTTGGAAAGTGGAACTACTGCTGCTGCATTACAAGCAGGCACACCACAGGTTGGAGTAGAGCTTTGAGTTCTATCCTTGATGTCAATGTGCTTGATTCAAGAAGATTAAGCATATGCATGGGGAGCCTACCTAAGACTAACAATGGGAGCCTACCTAATTTGACCTTGAAGCCACAATCATGGACAAAGGTAAGTAGCATTATATTTGTGGATCTGCCTGCGGGTACTGGCTTCTCTTATCCCAAAACAGAACGTGCTGTTCAGCAAAGTAGCTCTAAGCTTGTTCGCCATGCTCATCAATTTATTAGGAAGAGGTCGGAAGAGGGCTTGTTCCTGATGTTGGGCCGCATTTTGGGAGGTATTGCCACTTCACTTCTGTTTTCATCATTTGAATCATGGCTTGTTGCTGAGCACTTCAAGCGGGGCTTTGATCAACAATGGTTGTCATTAACATTCTCTAAGGCTATATTTCTTGGAAATGGTCTTGTTGCTATTTTGTCTGGGCTGTTTGGAAATGTACTTGTTGATACATTGGCTCTTGGACTTGTGGCCCCCTTTGATGCTGCTTCATGTTTTCTTGCTATTGGTGTGGCCATTGCTTTGGAATGTATTCATAGAGAATTCCTTAAAGATCGTTTTTGCCAAGGACAAGGAGCACATGGTATTATCAGTACTATCGTACAATTCCTCGTAAATCAGAGCATGCCACTTAGTCATATCTTCCAATGTGAGACAATAGTCTTTTCAAGGAATTGA 1104 0.4665 MSSHTSFEVLVAHMWRSWARVMGFLPKNQTLKLLFSVNMRKRVNPGLPEGYCGNAHKQARGSWGREGSGTGRWSRLGLERVELRMGKPLHVGPICCDRYCLFLPVTGERPSVKPCLVGKWNYCCCITSRHTTGWSRALSSILDVNVLDSRRLSICMGSLPKTNNGSLPNLTLKPQSWTKVSSIIFVDLPAGTGFSYPKTERAVQQSSSKLVRHAHQFIRKRSEEGLFLMLGRILGGIATSLLFSSFESWLVAEHFKRGFDQQWLSLTFSKAIFLGNGLVAILSGLFGNVLVDTLALGLVAPFDAASCFLAIGVAIALECIHREFLKDRFCQGQGAHGIISTIVQFLVNQSMPLSHIFQCETIVFSRN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00238 367 Pfam Serine carboxypeptidase 163 219 IPR001563 GO:0004185|GO:0006508
Gma13g00238 367 SUPERFAMILY alpha/beta-Hydrolases 160 220 IPR029058 -
Gma13g00238 367 Gene3D alpha/beta hydrolase 153 224 IPR029058 -
Gma13g00238 367 Gene3D - 2 64 IPR023213 -
Gma13g00238 367 PANTHER MOLYBDATE-ANION TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY DOMAIN PROTEIN-RELATED 211 318 - -
Gma13g00238 367 Pfam Sugar-tranasporters, 12 TM 215 320 IPR008509 GO:0015098|GO:0015689|GO:0016021
Gma13g00238 367 Pfam Transferase family 5 57 - -
Gma13g00238 367 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 211 318 IPR008509 GO:0015098|GO:0015689|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00238 Gma-Chr13 12300821 12305503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00238 3 54 Monolignol Biosynthesis Gene Families AT5G48930 44.231 1.01e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00238 K24175 - gmx:112998780 181.415