Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00231 ATGGTGAAGGAAACAGAGTACTACGATATCCTCGGAGTCTCTCCCTCTGCCTCCGATGACCAAATTCGCAAGGCCTATTACCACAAGGCAATGCAAGTTCATCCCGATAAAAACCCGAACGATCCTCACGCTGCCGAAAAGTTTCAGATTTTGGGTGAAGCGTACCAAATTTTGAGTGTTCCGGTGCAGAGGAATGCGTATAATCAAAATGGGAAGCATTCTGTATCTAGGGAAACTATGCTTGACCCCATGGCTGTCTTCGCCCTGCTCTTTGGGAGTGAATTGTTTGAGGACTACATAGGGCATCTAGCTGTGGCATCAATGGCTTCCTCTGAGCTAGCTGATGAAACTGAGGATCCTGATAAACTCAATGAGAAGCTAAAGGCAAGAATGTTCTACATTCACTTTTCAGCTGTCCAAAAAGAAAGAGAAGAAAAGCTAGCAAGAATTTTGAGGGATTATCTTGGCCAATATGTCCGGGGTAACAAAAAAGGATTCTTCCAACGCGCAGAATCTGAAACAAGGCGGCTTTCTCGTGCTGCATTTGGAGTTGATATGTTACATACCATCGGCTACATATATTCAAGACAGGCAGCACAAGAACTAGGTAAAAAAGCCATTTATCTTGGAGTGCCATTTCTGGCTGAATGGGTACGAAACAAAGGGCATTTCTGGAAATCACAATTCACAGCTGCTAAAGGTGCTTATCAGTTACTTCAGCTCCAAGACGACATGCGCAAGCAATTTAAAATGGATGGTAGTAGTGTGCCTGAAAATGATGTTGACTCTCACATTCGCCTTAACAAGGATACATTGATGAATTCCTTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTCGTACACGTGTGTCAAATGGTGCTAAGGGAAAATAACGTTAAGAAGGAGGAACTTAGACTTCGGGCTACTGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGTATCCAAAAGGAGAAACATTGAAGAAGAAGATTGCTGCTGATTCTGATGATGAAGAAAGCAGTTCTGAATCTTCAGATGATGAATCCTCTAGAGCAATTTCCTACCGAACTCCCTTTTTTACGCAGGGTCTCGGAAGGCTCTTCAAATGCCTTTGTAGTCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAAGCAAATGA 1176 0.4252 MVKETEYYDILGVSPSASDDQIRKAYYHKAMQVHPDKNPNDPHAAEKFQILGEAYQILSVPVQRNAYNQNGKHSVSRETMLDPMAVFALLFGSELFEDYIGHLAVASMASSELADETEDPDKLNEKLKARMFYIHFSAVQKEREEKLARILRDYLGQYVRGNKKGFFQRAESETRRLSRAAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAYQLLQLQDDMRKQFKMDGSSVPENDVDSHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELRLRATALKILGKIFQDKYPKGETLKKKIAADSDDEESSSESSDDESSRAISYRTPFFTQGLGRLFKCLCSPAFDVDDEEIVYKSK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00231 391 CDD DnaJ 6 59 IPR001623 -
Gma13g00231 391 Pfam X-domain of DnaJ-containing 140 324 IPR026894 -
Gma13g00231 391 Gene3D DnaJ domain 1 85 IPR036869 -
Gma13g00231 391 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Gma13g00231 391 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Gma13g00231 391 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 375 - -
Gma13g00231 391 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gma13g00231 391 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gma13g00231 391 PRINTS DnaJ domain signature 43 63 IPR001623 -
Gma13g00231 391 SMART dnaj_3 5 63 IPR001623 -
Gma13g00231 391 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 375 - -
Gma13g00231 391 Pfam DnaJ domain 6 68 IPR001623 -
Gma13g00231 391 MobiDBLite consensus disorder prediction 331 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00231 Gma-Chr13 12113849 12119151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00231 7 68 C2H2 Transcription Factor Family AT1G74250 38.806 1.56e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00231 - - gmx:100780838 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00231 13 12113849 12119151 Gma13g00231 13 12113849 12119151 ECH