Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00226 ATGAGCATGGGAATTCCTCTCCCGTCTTACGTTGTAGTTGCATGTGATGCCACGAGAGCTCGCAATGAGCATGAGGTCAAGCTTGTGGTTGATCATCTTAGAAGCAGGGGTGACATTCTCTCTGAAAGTGATAGCTTGCTAGTGTTCTGTGCCTTGCACAAGGTTGCTCACCCTATGGGGTACCAGACATTAGCATGCCCGGAGTCCTTCGCTGGCACCAATATTCGTGCAATGGAGGAGGAAGTTAACAGAAAAGCTGCAGCATATAAAAGTGTGCTTCTGCCGACTTATGAAGAACGTGAAAATAAAGGGGTAAAAATGGAGGTTAAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTTTACAACAGGTTACAAACTATAATGCATCTTGGGTTATCCTTGATAGGCATCTTCGGCAGGACATGAGATTCTACAGGAACAAGATATCATGTAAAATTGCACTGGTTAAAGATGACTTGTCGGTGGATATTTGGAGATCACATCATATACATGAAACAGATGTAACAGAACAAAAGCTTATCTATTCTTTGTCCAAGTGTGTTTCACTATCAGATTCTCATAGTATTGGAGATGAGGAGCAATCTGTTATCTTTTGCAAAAGCTATCCTCTTTCCATTGCTTCTGACACCTCTAATATGTCTAAGAGCAGTATGAAACATTCAAATGCTAACAAGTTAGGGGAGCATATTTCTTCAATAGATTTTGGATCTTCTTCAGGCAGAAGCATTCAAGTAGAATATAAGCATCCCATTAATTCTCAAATTTTGCAAAAGCAAAACAGATATGACTTCTTACCAAATTCTTCAGAGACTCCAATTCTTTGTGCTGGTTGCGGGACACAAACTGCATTATACACCAATGAGTTAAAGAGGTTCAGCTATTCTGAGATACAACTTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCACGTTTACAAGGGCATGCTTAAAGATGGACAACAAATTGCTGCTAAAGTAAGGAAAGAAGAAAGTAGACAAGGGTTTTCTGAATTCACTTCTGAGGTTTACGTCTTGAATTTCGCTCGGCACAAGAATATAGTAATGCTTTTGGGTTACTGTTTCAAAGATAGGCTAAACATTTTGGTATATGAGTATATTTGCAACAAGTCTCTTGATTGGCATTTAGTTGATAATAAAAATGCGGCTGTTCTTGAGTGGCATCAAAGATATGTCATTGCCATTGGAACTGCAAAAGGATTGCGTTTTCTACATGAGGAATGTCGTGGAGGTCCTATCATTCATCGTGACATGAGACCAAGCAATATACTCCTCACTCATGATTTTGTTCCCATGCTAGGTGATTTTGGCCTTGCCAAATGGAAGACTAGTGATAATACTCTACACACAAGGATAATGGGCACATTAGGATACCTCGCCCCTGAGTATGCTGAAGATGGTATTGTTTCTGTGGGAGTGGATGTGTATGCTTTTGGCATTATTTTGTTACAATTAATAACTGGACGCAAGCCAACTTCTAGTCCAGAGCAACATCTTTCCCTTCGACAATGGGCTGAGCTCAAGATTGAGAAGTTGGCATTTGATGAACTTATAGATTCTCGTCTAGGGGATTCTTATAACTCAAATGAGTTATACACCATGGCCAAGGTAGCATACTACTGTGTGCAAAGAGATCATCAGAAGCGCCCCTCTATTGGAGAGGGGATTGACTCTACATCTTTTGGGTTGCCTTCTATTGAGACTCCTCTTATGAAGGTGTTTACACTCTTTTGGATTTGGCTCAACTGCCACCACCTAGAGTGTTTGGCTAAGGAAGTTCCTAGGGGTTAG 1854 0.4035 MSMGIPLPSYVVVACDATRARNEHEVKLVVDHLRSRGDILSESDSLLVFCALHKVAHPMGYQTLACPESFAGTNIRAMEEEVNRKAAAYKSVLLPTYEERENKGVKMEVKVTAGFPIRQVILQQVTNYNASWVILDRHLRQDMRFYRNKISCKIALVKDDLSVDIWRSHHIHETDVTEQKLIYSLSKCVSLSDSHSIGDEEQSVIFCKSYPLSIASDTSNMSKSSMKHSNANKLGEHISSIDFGSSSGRSIQVEYKHPINSQILQKQNRYDFLPNSSETPILCAGCGTQTALYTNELKRFSYSEIQLATNDFSKDNLLGEGGYGHVYKGMLKDGQQIAAKVRKEESRQGFSEFTSEVYVLNFARHKNIVMLLGYCFKDRLNILVYEYICNKSLDWHLVDNKNAAVLEWHQRYVIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTSDNTLHTRIMGTLGYLAPEYAEDGIVSVGVDVYAFGIILLQLITGRKPTSSPEQHLSLRQWAELKIEKLAFDELIDSRLGDSYNSNELYTMAKVAYYCVQRDHQKRPSIGEGIDSTSFGLPSIETPLMKVFTLFWIWLNCHHLECLAKEVPRG 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00226 617 PANTHER OS01G0253100 PROTEIN 9 576 IPR045271 GO:0004714|GO:0006468
Gma13g00226 617 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Gma13g00226 617 Gene3D Transferase(Phosphotransferase) domain 1 389 582 - -
Gma13g00226 617 ProSiteProfiles Protein kinase domain profile. 312 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00226 617 Gene3D Phosphorylase Kinase; domain 1 286 387 - -
Gma13g00226 617 ProSitePatterns Tyrosine protein kinases specific active-site signature. 434 446 IPR008266 GO:0004672|GO:0006468
Gma13g00226 617 PANTHER RECEPTOR-LIKE KINASE 9 576 - -
Gma13g00226 617 SUPERFAMILY Protein kinase-like (PK-like) 295 578 IPR011009 -
Gma13g00226 617 Pfam Protein kinase domain 313 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00226 617 CDD STKc_IRAK 318 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00226 Gma-Chr13 12030671 12039108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00226 288 575 Trihelix Transcription Factor Family AT5G38560 42.761 2.36e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma13g00226 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00226 - - vun:114163670 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00226 13 12030671 12039108 Gma13g00226 13 12030671 12039108 ECH