Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00220 ATGGGATTGAATGTCCCGCAGAGGCAACTAACCCTTCTGTTGCTGATTGCGTTAGCAGCAGCTGAAAAAACCCTACATGGCTGCCGAAGCACTTGCGGAAGCGTTTCATCAATTCCGTATCCATTTGGCATAGGCAAATCTTCTGTCACCGGTGAAAACTGTTTCTTGGAGAAGGCATTGATGCTCACTTGCATAAACTCCACTTTATATCACGGAAACGGTAACGTCCAAATTCTGGACATAACCCTCGACAGTAAAATGGTCGTGCTTGCCTTCATCTCGAAAGTTTGCAAAAACGAATCTTTTGGTAGAGTAGAAACGAAAGGTAACGAAGCCGGTCTCAGAACTCCGGCTTTTACCATCTCTAGCGAGGACAACAAGTTCGTAACCGTAGGGTGCGATACCTATGGCTATCTCAACAGCTTTAACAACGACATCAGGTCTCAAATGGGGTGCTTGACAAGGTGTGACACCATAGAGAGTGTGCAAAGCATGCAGGGAGATGGAAAGTGTACGGGGATAGGGTGTTGCCAGATGGATATACCTCCTGGAATGAAGAATATTAGCATACAAGCATTCAGCTTTTACAATTTCAATGACTCTTCGGACTTCAAATGCGGCTATTCTTTTGTGGCAAAAAACGGCAACTATACTTTCTCGATGAAACATTTAAAATCGGTACCATTCGATAAGGCTCCCATGGTTATTGATTGGGCAGTTGGAAAACAGACATGTTTCAATTCCAAGGGTAAAGCATGCAAGAGTAATAGCGTTTGTGAGAACTCGCCCTCGGGATATGGCTACCGATGCAAATGTAAAAAAGGCTTTGAGGGAAACCCGTACCATCCGGATGGTTGCAAAGACATTGACGAATGTAAGACAGACAATCATACATGCATAAGTGAACAAAATTGTGTCAACACCATTGGATCCCATACATGTTTCTGTCCAAAGGGGCTTTCCGGAAATGGAACAAAGGAAGAAGGGTGCCACAAACGAGATGTAGTTCCGAAGGTTGTCATAGGAGTAGGAGCAGCAATTGTTATTCTGTTTGTGGGCACTACCTCATTGTACTTGATATACCAGAAAAGGAAACTCGTCAAAATTAGAGAGAAATACTTTCAGCAGAATGGTGGTTCCATTTTGCTACAGCAACTCTCTACAAGTGAAAACTCCTCCCGAATTACTCAAATTTTCACAGAAGAAGAACTAAAGAAAGCAACCAACAACTTCGACGAGAGCTTAATCATTGGTAGTGGAGGTTTTGGAACTGTTTTCAAAGGATATCTTGCAGATAACAGAGTTGTTGCTGTCAAAAAGTCCAAAATAGTTGATGGAAGCCAAAAGGAACAATTCATTAACGAGGTGATTGTTCTATCCCAAATCAATCATAGGAATGTGGTCAAACTCTTGGGATGCTGTTTAGAGAGAGAAGTTCCTTTACTGGTTTATGAATTTGTTAATAATGGTACCCTTTATGATTTTATACACACTGAAAGAAAGGTAAATAATGAAACTTGGAAAACCCATCTGAGGATAGCAGCAGAGTCAGCTGGAGCACTATCATATCTTCACTCAGCAGCCTCAATACCAATTATCCACAGAGATGTCAAGACTGCTAACATCCTCTTAGATAACACTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTACCAATTGATCAAACAGAAATAGCCACAATGGTGCAAGGAACTTTTGGTTACCTGGATCCAGAGTACATGCGTACAAGCCAACTAACTGAGAAAAGTGATGTCTACAGCTTTGGGGTAGTGCTTGTAGAGCTGCTAACAGGGGAGAAACCATATTCTTTTGGCAAGCCAGAAGAGAAAAGAAGTCTCACTAACCACTTTTTGTCTTGCTTGAAAGAGGATCGCCTATCTGATGTTGTTCAAGATGGCATTATGAATGAAGAAAATAAAAAGGAGATCATGGAGGTTGCTATTCTTGCTGCAAAGTGCTTGAGACTCAATGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGCGAATGAGGCTAACCGAGAAGCATCCTTGGATAAATACATTCCAAAATCCAGAGGAGGCTCAGTTGCTTCAAAAGGGATCATCTAGCCTGTGTGTATCAGGTGATAGCGGCAGCCATCAATACACTGGGTATGACAGCATTAATGATCATGTACAAATTGCTTTCGATGATGGAAGATAA 2226 0.4205 MGLNVPQRQLTLLLLIALAAAEKTLHGCRSTCGSVSSIPYPFGIGKSSVTGENCFLEKALMLTCINSTLYHGNGNVQILDITLDSKMVVLAFISKVCKNESFGRVETKGNEAGLRTPAFTISSEDNKFVTVGCDTYGYLNSFNNDIRSQMGCLTRCDTIESVQSMQGDGKCTGIGCCQMDIPPGMKNISIQAFSFYNFNDSSDFKCGYSFVAKNGNYTFSMKHLKSVPFDKAPMVIDWAVGKQTCFNSKGKACKSNSVCENSPSGYGYRCKCKKGFEGNPYHPDGCKDIDECKTDNHTCISEQNCVNTIGSHTCFCPKGLSGNGTKEEGCHKRDVVPKVVIGVGAAIVILFVGTTSLYLIYQKRKLVKIREKYFQQNGGSILLQQLSTSENSSRITQIFTEEELKKATNNFDESLIIGSGGFGTVFKGYLADNRVVAVKKSKIVDGSQKEQFINEVIVLSQINHRNVVKLLGCCLEREVPLLVYEFVNNGTLYDFIHTERKVNNETWKTHLRIAAESAGALSYLHSAASIPIIHRDVKTANILLDNTYTAKVSDFGASRLVPIDQTEIATMVQGTFGYLDPEYMRTSQLTEKSDVYSFGVVLVELLTGEKPYSFGKPEEKRSLTNHFLSCLKEDRLSDVVQDGIMNEENKKEIMEVAILAAKCLRLNGEERPSMKEVAMELERMRLTEKHPWINTFQNPEEAQLLQKGSSSLCVSGDSGSHQYTGYDSINDHVQIAFDDGR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00220 741 SMART egf_5 291 331 IPR000742 -
Gma13g00220 741 SMART egf_5 244 287 IPR000742 -
Gma13g00220 741 SMART egfca_6 288 331 IPR001881 GO:0005509
Gma13g00220 741 Gene3D Transferase(Phosphotransferase) domain 1 487 703 - -
Gma13g00220 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Gma13g00220 741 ProSiteProfiles EGF-like domain profile. 288 331 IPR000742 -
Gma13g00220 741 SUPERFAMILY Protein kinase-like (PK-like) 389 682 IPR011009 -
Gma13g00220 741 SMART serkin_6 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00220 741 Gene3D Phosphorylase Kinase; domain 1 376 486 - -
Gma13g00220 741 Pfam Protein kinase domain 415 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00220 741 ProSiteProfiles Protein kinase domain profile. 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00220 741 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 705 IPR045274 GO:0007166
Gma13g00220 741 Gene3D Laminin 292 330 - -
Gma13g00220 741 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 12 705 - -
Gma13g00220 741 Gene3D Laminin 242 291 - -
Gma13g00220 741 Pfam Calcium-binding EGF domain 288 330 IPR001881 GO:0005509
Gma13g00220 741 ProSiteProfiles EGF-like domain profile. 241 287 IPR000742 -
Gma13g00220 741 CDD EGF_CA 288 322 - -
Gma13g00220 741 CDD STKc_IRAK 417 684 - -
Gma13g00220 741 SUPERFAMILY EGF/Laminin 288 323 - -
Gma13g00220 741 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00220 Gma-Chr13 11778491 11782891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00220 28 741 Receptor kinase-like Gene Family AT1G21230 44.945 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gma13g00220 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00220 - - gsj:114381577 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00220 13 11778491 11782891 Gma13g00220 13 11778491 11782891 ECH