Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00218 ATGGAATACTGCTTGCAATTGTGTCGGGTGTTAATGTTTGCATTAGCCCTGGCCATGGTAGTTGTTGTTGCACCTGATCGAACCCTTTCTGAAGTCACACCTTCTTCACTGAACCAAGCAGCCCTTTCTGGCTGCAAATCCTCTTGTGGAGATGTCGAAATTTCATATCCATTCGGTATAGGATACTCATCTTTACCAGATCACAAGCCCTGTTTCTTGCAGTCAAAGTTTGAACTTACTTGCAACGACAGCTCCAAAAAATTACTTTGGGCTAACTTGGAAGTTTCAAATATAAATGTCACAAGTCATCAGATGGTGGTATCCTTTTTCGTCTCAGAGTTTTGCAGTAAAGAAAAAGCCTTTAATAAGCCCTGGATTAAAACAGGCAGGTTCAGCATTTCAAGAAAGGAAAACAAGTTCCTCACTGTAGGCTGCGATAGTTATGGCTATCTCAATAGTTACTTCGATGGGGATTTGTATTCAACAGGGTGCTTAACGAGATGTTATGGCAATAACAACTTGATTGATAATGAAACTTGTTGGGGTATAGGGTGTTGCCAGGTAGATATTCCTCCTCTAATGAGGAATATCACTGTAGAAGCATCTTCTTTCGTCCAATCAGGGACGGATAGTAGTGGTGTAAATGCCTCATCAACTACCTTCTTCAATTCAACCTGCAGTTATTCCTTTGTTGTCAGAAATGGGTTTTATAAATTTTCTACTACTCATTTACAAAGTTTCCCAAACAAGACGCTCCCCATGGTTATTGATTGGACTGCGGGAGACAAAAGCTGTAAGGATTCCATGGGTAGAGGCGACTACGCGTGCAAGGCGAATAGCTATTGCGACGACGGCGACACTGATTATGGTTACCGATGCAGATGTAAAGATGGCTATGAAGGAAATTCATATCTTGGCTGCACAGAAATTTTGGAATGTACGACCAGGAGACACAATTGTTCAAGTGAAGATTATTGTCGCGAAGTCCGTGGGTCTTTCGAATGTTTCTGCCCCGATGGACTAATCGGAAATGGAACAATAGAAGGTGGAGGATGCCAACCAAAGCAGCGATATAATGTATTTACCAAGGTTGCCATTGGTGTAGGTGTAGGATTACTTGGTCTATTTATGGGGACTTCTTGGCTATACTTGATATACCAGAAAAGGAAAGTCCTCAAATTAAAGGAGAAGTTCTTTCAGCAAAATGGTGGTATGATTCTAAAACAGCAACTCTCAGCAAGAGAAGACTCGACGCAGTCCGCCACAATTTTCACTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGTTTAATCATCGGTAAAGGGGGTTATGGTACAGTTTTCAAAGGAGTTCTCTCAAATAACACTATTGTTGCTATCAAAAAGTCCAAAACTGTGGATCAGAGCCAGGTGGAGCAATTCATTAATGAGGTCATTGTACTATCACAAATTAATCACAGGAATGTGGTCAAGCTCCTGGGTTGTTGTTTAGAGACGGAAGTTCCTTTACTGGTTTATGAATTTGTTAGCAACGGTACCCTTTTTCATTATTTGCATAATGAAGGCCAATTAGCCAATGTGTGTTGGAAAACACGTCTAAGGATAGCAACAGAGGCAGCTGGAGCTCTGTCATATCTACACTCAGAGGCCTCCATACCCATCATCCATAGAGATGTCAAGACTGCTAACATCCTCTTGGATGATGCTTGCACTGCCAAAGTTTCTGATTTTGGTGCTTCAAGATTGATTCCACTTGATCAAACTGAATTAGCCACAATAGTGCAAGGAACCATCGGGTATTTAGACCCAGAGTACATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTTTATAGCTTTGGGGTGGTGCTTGTGGAACTGCTAACAGGGGAGAAACCTTTCTCTTTTGACAAGCCAGAAGATAAACGAAGTCTTACAGTTCACTTTCTATGTTGCTTGAAAGAGGATCGCTTGTTTGATGTTCTTCAAATTGGTATTTATGATGAAGAAAATAAACAGGAGATCATGGAAGTTGCTATTCTTGCGGCCAAGTGCTTGAGACTTAGAGGGGAGGAAAGGCCTGGTATGAAGGAAGTGGCAATGGAGTTGGAAGGAATACGACTAATGGAGAAACAACCAAGGACCAATGCAGGCCAAAATTTTGAGGAGACTCAGTACTTGCTTCATGGGGCATATAGCACTCATGAAAATGGTGATAGTAGTGGCCAACAAAATACTGGATATGACAGCTTGAGAGATATTGAATTAATTGACTTCGGTGATGGAAGATGA 2301 0.4137 MEYCLQLCRVLMFALALAMVVVVAPDRTLSEVTPSSLNQAALSGCKSSCGDVEISYPFGIGYSSLPDHKPCFLQSKFELTCNDSSKKLLWANLEVSNINVTSHQMVVSFFVSEFCSKEKAFNKPWIKTGRFSISRKENKFLTVGCDSYGYLNSYFDGDLYSTGCLTRCYGNNNLIDNETCWGIGCCQVDIPPLMRNITVEASSFVQSGTDSSGVNASSTTFFNSTCSYSFVVRNGFYKFSTTHLQSFPNKTLPMVIDWTAGDKSCKDSMGRGDYACKANSYCDDGDTDYGYRCRCKDGYEGNSYLGCTEILECTTRRHNCSSEDYCREVRGSFECFCPDGLIGNGTIEGGGCQPKQRYNVFTKVAIGVGVGLLGLFMGTSWLYLIYQKRKVLKLKEKFFQQNGGMILKQQLSAREDSTQSATIFTAEQLKKATNNFDESLIIGKGGYGTVFKGVLSNNTIVAIKKSKTVDQSQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFHYLHNEGQLANVCWKTRLRIATEAAGALSYLHSEASIPIIHRDVKTANILLDDACTAKVSDFGASRLIPLDQTELATIVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFDKPEDKRSLTVHFLCCLKEDRLFDVLQIGIYDEENKQEIMEVAILAAKCLRLRGEERPGMKEVAMELEGIRLMEKQPRTNAGQNFEETQYLLHGAYSTHENGDSSGQQNTGYDSLRDIELIDFGDGR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00218 766 ProSiteProfiles Protein kinase domain profile. 436 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00218 766 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 38 736 IPR045274 GO:0007166
Gma13g00218 766 ProSitePatterns Protein kinases ATP-binding region signature. 442 465 IPR017441 GO:0005524
Gma13g00218 766 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 38 736 - -
Gma13g00218 766 Gene3D Phosphorylase Kinase; domain 1 401 511 - -
Gma13g00218 766 Gene3D Laminin 263 348 - -
Gma13g00218 766 SUPERFAMILY EGF/Laminin 312 346 - -
Gma13g00218 766 ProSitePatterns EGF-like domain signature 2. 293 307 IPR000742 -
Gma13g00218 766 CDD STKc_IRAK 442 709 - -
Gma13g00218 766 SUPERFAMILY Protein kinase-like (PK-like) 417 707 IPR011009 -
Gma13g00218 766 Gene3D Transferase(Phosphotransferase) domain 1 512 731 - -
Gma13g00218 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Gma13g00218 766 SMART egf_5 264 308 IPR000742 -
Gma13g00218 766 SMART egf_5 312 353 IPR000742 -
Gma13g00218 766 Pfam Wall-associated receptor kinase galacturonan-binding 45 107 IPR025287 GO:0030247
Gma13g00218 766 Pfam Protein kinase domain 440 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00218 766 SMART serkin_6 436 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00218 Gma-Chr13 11705539 11709922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00218 45 766 Receptor kinase-like Gene Family AT1G21230 45.714 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gma13g00218 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00218 - - gmx:100785674 1532.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00218 13 11705539 11709922 Gma13g00218 13 11705539 11709922 ECH