Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00213 ATGTCTACAGCTGGTCAGGTCATCAAGTGCAGAGCTGCGGTGGCATGGGAAGCAGGGAAGCCACTATCGATAGAAACCATAGAAGTGGCACCACCCCAGAAAGGTGAAGTGCGTTTGAAGATCCTCTTCAACTCCCTTTGCCGTACAGATGTTTACTGGTGGGATGCTAAGGGCCAGACTCCGCTGTTTCCTCGTATCTTAGGCCACGAAGCTTCGGGGATTGTGGAGAGCGTGGGCAAGGGTGTGACACATCTGAAACCAGGTGACCATGCTCTCCCAATATTCACTGGGGAGTGTGGTGAATGCACCTATTGCAAGTCTGAAGAGAGCAACCTGTGTGAGCTTCTCAGGATCAACACTGACAGAGGAGTGATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGACAACCTATTTACCACTTCGTTGGAACCTCCACTTTCAGTGAATACACTGTTCTCCATGAAGGATGTGTCGCCAAGATCAACCCTGCTGCCCCTCTTGACAAAGTTGCTGTTGTCAGTTGTGGATTCTGCACAGGTTTTGGGGCTACTGTGAATGTTGCAAAGCCAAAGCCTAATAATACTGTTGCTGTATTTGGATTAGGAGCTGTTGGTCTTGCTGCCTGTGAAGGGGCAAGGGTTTCTGGTGCATCTAGAATCATCGGGGTTGATTTACTTACCAATCGATTTGAACAAGCCAAACAATTTGGGGTCACTGATTTTGTGAACCCGAAAGATCACAACAAACCAGTTCAAGAGGTCATTGCTGAAATGACTAATGGAGGAGTAGATCGTGCTATTGAATGCACAGGAAGCATCCAAGCATCAATCTCGGCATTTGAATGCACTCATGATGGTTGGGGTACTGCTGTCCTTGTTAGTGTGCCAAAGAAGGATGCAGAATTCAAAACTCATCCTATGAAGTTCATGGAAGGGAGAACTCTTAAGGGTACCTTCTATGGTCACTATAGACCCCGCACTGACATTCCTGGTGTTGTGGAGAAGTACCTCAACAAGGAGCTGGAGCTGGACAAATTTATCACTCACTCTGTCCCATTCTCAGAGATCAACACTGCATTTGATCTTATGCTGAAAGGGGAGGGAATAAGGTGCCTCATCTGCATGGAAGAGTAA 1140 0.4719 MSTAGQVIKCRAAVAWEAGKPLSIETIEVAPPQKGEVRLKILFNSLCRTDVYWWDAKGQTPLFPRILGHEASGIVESVGKGVTHLKPGDHALPIFTGECGECTYCKSEESNLCELLRINTDRGVMLSDGKTRFSKNGQPIYHFVGTSTFSEYTVLHEGCVAKINPAAPLDKVAVVSCGFCTGFGATVNVAKPKPNNTVAVFGLGAVGLAACEGARVSGASRIIGVDLLTNRFEQAKQFGVTDFVNPKDHNKPVQEVIAEMTNGGVDRAIECTGSIQASISAFECTHDGWGTAVLVSVPKKDAEFKTHPMKFMEGRTLKGTFYGHYRPRTDIPGVVEKYLNKELELDKFITHSVPFSEINTAFDLMLKGEGIRCLICMEE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00213 379 Gene3D - 18 369 - -
Gma13g00213 379 PANTHER ALCOHOL DEHYDROGENASE-RELATED 3 377 - -
Gma13g00213 379 SUPERFAMILY GroES-like 328 375 IPR011032 -
Gma13g00213 379 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Gma13g00213 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 340 IPR036291 -
Gma13g00213 379 CDD alcohol_DH_plants 8 375 - -
Gma13g00213 379 Pfam Zinc-binding dehydrogenase 205 329 IPR013149 -
Gma13g00213 379 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Gma13g00213 379 PANTHER ALCOHOL DEHYDROGENASE 3 377 - -
Gma13g00213 379 SUPERFAMILY GroES-like 3 186 IPR011032 -
Gma13g00213 379 Gene3D - 182 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00213 Gma-Chr13 11499149 11505433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00213 16 369 Monolignol Biosynthesis Gene Families AT1G72680 25.691 3.13e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00213 K18857 - gmx:100775490 771.155