Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00200 ATGTTCCCCGGACCCCTTATAAATGCAACAACAAATGATAATATTCATGTCAATGTTTTCAATGATTTGGATGATCCCTTGCTGTTTACATGTTTTAGGAGTAGCACTAAACTTACACTCTATAGACATGGCAAGACATATTTGCTTAGGATATCAAACGTAGGGACAGCATGGAGCTTCAATTTCAGGATTCAAAATCATCAATTGGTTTTGGTTGAAACTAAAGGTTCTTATGTCAATCAAATAGAGTTGGAGTCTCTTGATGTTCATGTAGGCCAATCCTACTCAGTTCTTGTCACAGCAAACCAAAATGCTGCTGATTACTACATAGTAGCCTCTCCTAAACTGAGTAATGCCACAAATAATAACACTCTTGTTGGTGTTGCTGTGCTTCATTATGACAACTCTACCACACCGGCTAATGGGTCTCTTCCAAGTGGTCTAGATCCATTTGATCTGCAATTCTCCATCAACCAAGCAAAATCCATTAGGTGGAACCTCACCACTGGAGCTGCAAGGCCTAATCCCCAGGGAATGTTCCATGTAACAAATGTGACAATAATTGAAACTTTCATTCTAAATGCATCAACAACAACTATTGATGGGTTATCTCGCTACTCTGTCAACAATGTGTCTTTCTTGATCCTAGATACACCACTGAAACTAGCTGATTTCTTTTCCAATAGAACTGGTGTATATGAACTTGATGCTTTTTCTAAGAACACTTCAAATGCTAACGCCGTGCGTGGAGTTTTCGTAGCTAGTGCATTACATAAAGGTTGGACTGAGATAGTGCTAGAAAACAATTTAGACATCATTGATACTTGGCATTTGGATGGATATAGCTTCTTTGTTGTTGGGTATAATGTGAGGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTGACATATACTGGTGCAAAAATCATTCAGAATGCTCGCTTGCTAGTAGAGAAAATAGGAAAACCACTTGAACTAGACACTGATGGTGAAGAGCTCTATGTGAGGGTTTATGATGTTGATCCCAACCCTGCCAAGGAGAAGCCTCCTCCACAGAATCTCCTTCTATGTGGTTAG 1083 0.3989 MFPGPLINATTNDNIHVNVFNDLDDPLLFTCFRSSTKLTLYRHGKTYLLRISNVGTAWSFNFRIQNHQLVLVETKGSYVNQIELESLDVHVGQSYSVLVTANQNAADYYIVASPKLSNATNNNTLVGVAVLHYDNSTTPANGSLPSGLDPFDLQFSINQAKSIRWNLTTGAARPNPQGMFHVTNVTIIETFILNASTTTIDGLSRYSVNNVSFLILDTPLKLADFFSNRTGVYELDAFSKNTSNANAVRGVFVASALHKGWTEIVLENNLDIIDTWHLDGYSFFVVGYNVRGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGEELYVRVYDVDPNPAKEKPPPQNLLLCG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00200 360 Pfam Multicopper oxidase 37 135 IPR001117 -
Gma13g00200 360 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 1 28 - -
Gma13g00200 360 PANTHER MULTI-COPPER OXIDASE 1 28 IPR045087 -
Gma13g00200 360 Pfam Multicopper oxidase 241 292 IPR011706 GO:0005507|GO:0016491
Gma13g00200 360 Gene3D - 183 310 IPR008972 -
Gma13g00200 360 Gene3D - 7 172 IPR008972 -
Gma13g00200 360 SUPERFAMILY Cupredoxins 190 291 IPR008972 -
Gma13g00200 360 PANTHER MULTI-COPPER OXIDASE 43 289 IPR045087 -
Gma13g00200 360 SUPERFAMILY DNA/RNA polymerases 290 339 IPR043502 -
Gma13g00200 360 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 43 289 - -
Gma13g00200 360 SUPERFAMILY Cupredoxins 26 174 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00200 Gma-Chr13 11146781 11149660 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00200 282 332 Core DNA Replication Machinery Family AT2G27120 84.615 4.36e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00200 K19791 - gmx:100798339 514.998