Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00197 ATGCAGGTTTTTAAGTTTCGAACATCTTGGTACAGACACCTCAGAAAACAGGTTTATGGTTCTGACTTTTCTAATCAACAAGATATGATCTCCTGTCCGATTTTCGTTTCTGGATCTTACGACAGCGTCCTCGGTTTGGATCTAACATCCTGTACCAAGATGTTCGACACCATTTCGCCAGTTACGGCATACGACCTGCAGTTGAATATTTTGATTATGAGATGGTCCATACCAAATTGTACAAAGTGCGAAGCAAAAGGCAAGAGATGTAAATGGAAGAACAACAGCAACACAGAAGCAGACATTGAATGTGTTGACTGCAAACGGAAAAGAATCCATGTTCCCCAATCTTTTATCTTCGCTACTACAGGATCAATTCTTTTGGGGCTGGTGGCCATTGTTATCTTTAAGATAGCACTCTATTTTAGACAGAAAGAAGAAGACCAAGCAAGAGTGGCCAAGTTTTTAGAGGATTACAGGGCAGAAAAGCCTGCAAGATTTACCTATGCTGATTTGAAAAGAATCACCGGTGGCTTTAAAGAAAAGTTAGGGGAAGGAGCTCACGGGGCTGTATTCAGAGGAAAACTTTCAAATGAGATTCTAGTGGCTGTGAAGATCCTCAATAATACAGAGGGAGAAGGGAAGGAGTTCATTAATGAAGTGGGAATCATGGGAAAAATTCATCACATCAACGTGGTTCGTTTGCTTGGCTTCTGTGCAGAAGGATTTCATCGTGCTCTTGTCTACAATTTGTTTCCAAACGGATCCTTACAACGATTTATAGTTCCACCGGACGACAAGGACCATTTCCTTGGCTGGGAGAAGCTGCAACAGATTGCTCTTGGTATAGCTAAAGGAATTGAGTATCTTCATGAAGGTTGTAATCAACCCATTATTCATTTTGACATCAATCCTCACAATGTTCTACTTGATGACAACTTCACTCCAAAAATTTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCTAGTTTGGTGTCCATGACAGCTGCAAGAGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCCAGAAACTTTGGAAATGTGTCTTACAAGTCTGATATTTACAGTTATGGAATGTTATTGTTAGAAATGGTTGGAGGAAGAAAGAATGTAGACATGTCTTCTGCCCAAGATTTCCATGTTTTGTATCCGGATTGGATCCATAACCTGATTGATGGAGATGTACATATTCATGTTGAGGATGAAGGTGATATTAAAATTGCAAAGAAATTAGCAATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAATCGTCCATCTATAAAATTTGTCATACAAATGTTAGAAACTGGAGAGGAAAACCAGTTAAATGTGCCTCCTAATCCATTCAACTCAACCACTTCAACTATTACTAGTGGACACACTAGAGTTACAAGACGACCTTTGGAGTTAGAAGTTATTCAAGAATGA 1464 0.3975 MQVFKFRTSWYRHLRKQVYGSDFSNQQDMISCPIFVSGSYDSVLGLDLTSCTKMFDTISPVTAYDLQLNILIMRWSIPNCTKCEAKGKRCKWKNNSNTEADIECVDCKRKRIHVPQSFIFATTGSILLGLVAIVIFKIALYFRQKEEDQARVAKFLEDYRAEKPARFTYADLKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKILNNTEGEGKEFINEVGIMGKIHHINVVRLLGFCAEGFHRALVYNLFPNGSLQRFIVPPDDKDHFLGWEKLQQIALGIAKGIEYLHEGCNQPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSAQDFHVLYPDWIHNLIDGDVHIHVEDEGDIKIAKKLAIVGLWCIQWQPVNRPSIKFVIQMLETGEENQLNVPPNPFNSTTSTITSGHTRVTRRPLELEVIQE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00197 487 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 487 IPR045874 GO:0004672
Gma13g00197 487 Gene3D Transferase(Phosphotransferase) domain 1 252 460 - -
Gma13g00197 487 Gene3D Phosphorylase Kinase; domain 1 150 251 - -
Gma13g00197 487 ProSiteProfiles Protein kinase domain profile. 177 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00197 487 ProSitePatterns Protein kinases ATP-binding region signature. 183 205 IPR017441 GO:0005524
Gma13g00197 487 PANTHER RECEPTOR-LIKE KINASE 11 487 - -
Gma13g00197 487 Pfam Protein kinase domain 180 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00197 487 SUPERFAMILY Protein kinase-like (PK-like) 163 447 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00197 Gma-Chr13 11107824 11109395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00197 127 460 Receptor kinase-like Gene Family AT1G66910 43.228 7.24e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma13g00197 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00197 - - gmx:100790964 949.118