Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00196 ATGGCTAGAGGTTTCAAAGACAAATTGGGGGAAGGAGGCTATGGCTTTGTATTGAAGGGAAAGTTGCGTAGTGGGCCTTCTGTGACAATTAAAATGCTACATAAAGCAAAAGGTAGCAGCCAAGACTTTATTAGTGAAATTGCAACAATTGGAAGAATACATCATCAAAATGTAGTACAACTAATTGGATATTGTGCCGAAGGCTCAAAACATTACCTTGTTTATGAATTCATGCCCAATGGATCTCTTGACAAATTTATTTTTACCAAAGATGAAAGTATACATTTAACATATGACGAAATATTTAATATAGCAATTGGAGTAGCTCGTGGGATTGCTTATCTCCATCATGGGTGCCAGATGCAAATTTTGCATTTGGATATCAAACCCCATAACATCCTTCTTGATGAAACATTCACCCCAAAGGTCTCTGACTTTGGATTGGCTAAACTATATCCAATAGATAATAGCATTGTGACTATGACAGCGGCAAGAGGGACAATTGGGTATATGGCTCCAGAATTATTTTATAAAAATATTGGAGGAATATCCCACAAGGCTGATGTTTATAGCGTTGGGATGCTTTTGATGGAGATGGCAAGAGACATTGAAAGTCTGAAAATACCTCCAAAGCCTTCTCTATATCCACATGAGACAATGGAAAATGATCAAAGCATCTACTCTAGTCAAACAATGTCAACAGACTTCATTAGTTCTTCTAGTTATTCCAAGGAAATTGTGACTAATCCTTTGGTAGAGGATGCTATTTGA 771 0.3696 MARGFKDKLGEGGYGFVLKGKLRSGPSVTIKMLHKAKGSSQDFISEIATIGRIHHQNVVQLIGYCAEGSKHYLVYEFMPNGSLDKFIFTKDESIHLTYDEIFNIAIGVARGIAYLHHGCQMQILHLDIKPHNILLDETFTPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSVGMLLMEMARDIESLKIPPKPSLYPHETMENDQSIYSSQTMSTDFISSSSYSKEIVTNPLVEDAI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00196 256 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 200 - -
Gma13g00196 256 Pfam Protein kinase domain 6 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00196 256 Gene3D Transferase(Phosphotransferase) domain 1 82 248 - -
Gma13g00196 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Gma13g00196 256 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Gma13g00196 256 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00196 256 SUPERFAMILY Protein kinase-like (PK-like) 6 201 IPR011009 -
Gma13g00196 256 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00196 256 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 200 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00196 Gma-Chr13 11099518 11100510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00196 1 199 Receptor kinase-like Gene Family AT4G18250 52.239 2.82e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma13g00196 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00196 - - gmx:100305367 398.282