Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00195 ATGTTGTTCTGTTGGGCCACCAAGATAGTTGATGAGCCTCCTAAGACTGATCTTCAGTTCTGGAAGAATTTGTTCCTTGTAATTACAATCAATGGCATGTTCCCTAGACCCCTTATAAATGCAACAACAAATGATAACATTCATGTCAATGTTTTCAATGATTTGGATGATCCCTTGCTGTTTACATGGATATCAAACGTAGGGACAGCCTGGAGCTTCAATTTCAGGATTCAAAATCATCAATTGGTTTTGGTTGAAACTGAAGGTTCTTATGTCAATCAAATAGAGCTGGAGTCTCTTGATGTTCATGTAGGCCAATCCTACTCAGTTCTTGTCACAGCAAACCAAAATGCTGCTGATTACTACATAGTAGCCTCTCCTAAACTGAGTAATGCCACAAATAATAACACTCTTGTTGGTGTTGTTGTGCTTCATTATGACAACTCTACCACACCGGCTAATGGGTCTCTTCCAAGTGGTCCAGATCCATTTGATCTGCAATTCTCCATCAACCAAGCAAAATCCATTAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTCAATAAGGTTTGGAAGGGAAAACTGTCAGAGGCCAAGGCTAGTGGAAATTCTATAAAGATCCAGGAAGCACAGGATATGGTTGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGTTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTGACATATACTGGTGCAAAAATCATTCAGAATGCTCGCTTGCTAGTAGAGAAAATAGGAAAACCACTTGAACTAGACACTGATGGTGAAGAGCTCTATGTGAGGGTTTATGATGCTGATCCCAACCCTGCCAAGGAGAAGCCTCCTCCACAAAATCTCCTTCTATGTGGTTAG 927 0.4045 MLFCWATKIVDEPPKTDLQFWKNLFLVITINGMFPRPLINATTNDNIHVNVFNDLDDPLLFTWISNVGTAWSFNFRIQNHQLVLVETEGSYVNQIELESLDVHVGQSYSVLVTANQNAADYYIVASPKLSNATNNNTLVGVVVLHYDNSTTPANGSLPSGPDPFDLQFSINQAKSISFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKVARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGEELYVRVYDADPNPAKEKPPPQNLLLCG 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00195 308 Pfam Multicopper oxidase 64 148 IPR001117 -
Gma13g00195 308 Pfam DNA polymerase family B 197 271 IPR006134 GO:0000166|GO:0003677
Gma13g00195 308 Gene3D Palm domain of DNA polymerase 169 299 IPR023211 -
Gma13g00195 308 Gene3D - 27 161 IPR008972 -
Gma13g00195 308 PANTHER MULTI-COPPER OXIDASE 24 63 IPR045087 -
Gma13g00195 308 Pfam Multicopper oxidase 27 63 IPR011707 GO:0005507
Gma13g00195 308 SUPERFAMILY Cupredoxins 27 171 IPR008972 -
Gma13g00195 308 SUPERFAMILY DNA/RNA polymerases 175 281 IPR043502 -
Gma13g00195 308 PANTHER MULTI-COPPER OXIDASE 64 177 IPR045087 -
Gma13g00195 308 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 24 63 - -
Gma13g00195 308 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 64 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00195 Gma-Chr13 11082694 11085817 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00195 177 280 Core DNA Replication Machinery Family AT1G08260 95.192 2.44e-61 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00195 K02324 - gsj:114381569 264.618