Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00183 ATGGCATTTCGCCAGTCGAGGCTGCGAAACAGGGACTTCATGTGGATTCGCGTGCTTTCAGCTTTTTCAGCATCCACAACCTTCCCGACACCTCTGGTAGGTCACAGCGCGGCTCGCGCAGGTTTCAACCAGGCGGTGATCGACACGTTCCTGACGCTGGAGTGTGTGGTGTGCTTGAACGAGTTCGAGGACACCGAAACACTGCGTTTAATCCCCAAGTGCGACCTCGTGTTCCACTCTGAGTGCATAGACGAGTGGATAGCTTCCCACACCACTTACCTCGTGTGTCGTGCCAAACCCGTCCCTGTTTCTGCCAACATCAATGGCGAAATGCCATGCTGA 342 0.5497 MAFRQSRLRNRDFMWIRVLSAFSASTTFPTPLVGHSAARAGFNQAVIDTFLTLECVVCLNEFEDTETLRLIPKCDLVFHSECIDEWIASHTTYLVCRAKPVPVSANINGEMPC 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00183 113 SUPERFAMILY RING/U-box 49 96 - -
Gma13g00183 113 Pfam Ring finger domain 54 96 IPR001841 -
Gma13g00183 113 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 103 IPR013083 -
Gma13g00183 113 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 52 100 - -
Gma13g00183 113 PANTHER RING FINGER DOMAIN-CONTAINING 52 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00183 Gma-Chr13 10714125 10714753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00183 36 98 Rapid Response to Elicitors AT3G05200 50.000 2.59e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00183 K10664 - gmx:106795606 219.55