Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00181 ATGTCGTCGACGACGCAGAATCGTCGTTCGTCGTTTACTTCCTCGACGGCGTCGTCTTTGGCGAAAGCGAAACGACATCCATCGTCGGTGTCGTCGTCGTCGTCGGGGAAGGCGAAGGTGGTTTCTACTCAGAACTTGGCTGTGAAGAGAGCGCCTCTCGCCAACCTCACTAATCAAAGGAACGCGCCTTAttcttcttcttcttcttcttcttcttTGGTGCAAGGTTCAAATAAAGTTGCCAAGACCAAGAAAGAGGCTCCTGCAAGAACCAGCGTCACAAAATCAACAATTTCTGGGAACAAATCTTCCCAGTTAAAATCTGTTAACTCAAGCTCCGTTGTTATTCCAAAGGCTAATTCTTTACCACAAAAGAAGGATGCTGCTCCCACAGTTGCCACATTTGCCGTGCCTGTTCGTAGCAGCATTGATGTTTCTCCTAGTAAATCAGATGGAAGGTTCGTTTCTATGGATGAGACAACATCTTCATGTGATTCTATCAAGAGTCCGGATGAAGTTGAATATCTGGATAACAGGGATGTTTCAGATGTTGATTCAATTCAGAAAAAGATAATAAGCAATTTGAACATTTCTGATACCACAGAGCCCGAAGGAAACGTATGTAGTAGGGAAATAATTGTTGAGTTGGAAGAAAGAGTGGACAAGATTGTCAATATCGATAACATTTACTCTGATACGCAGCTTTGTGCAACCTATGTTTGTGACATCTACAAACACCTACGTGAATCCGAGGAAAAGAAAAGGCCTTCCACTGACTTCATGGACACAATTCAGAAGGACATAAATGTTAGCATGCGCGCTATATTGGTTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGTCTTGTACCTGAAACATTGTATTTGACAGTGAACTACTTAGATCGGTATCTTTCAGGGAATGCTATGAATAGGCAAAGGTTACAACTTCTTGGTGTTTCATGCATGATGATTGCATCTAAATACGAGGAGATTTGTGCACCTCAGGTGGAAGAATTTCGTTATATAACTGACAATACTTACTTAAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTATCTTAAGTTCGAAATGACAGCCCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTGCTCATGATGTCCAGGAGATCCCTTCACTTCAACTGGAGTGTCTAACCAACTTTATTGCCGAATTATCTCTCTTGGAGTACAGTATGCTGTGTTATCCTCCATCACAAATAGCTGCCTCTGCAATTTTCCTTGCCAGATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCCACATTGCAGCATTACACGCTCTACCGGCCTTCGGACTTGTGTGCATGTGTAAAAGATCTCCATCGTCTTTGTTGCAGCAGCCATGATTCTAATTTACCTGCAATCAGAGATAAATACAGTCAGCATAAGTACAAATGTGTGGCCAAGAAGTGCATCCCTCCTTCAATACCTCAAGAAGTTTTCCAGAGTTGA 1518 0.4163 MSSTTQNRRSSFTSSTASSLAKAKRHPSSVSSSSSGKAKVVSTQNLAVKRAPLANLTNQRNAPYSSSSSSSSLVQGSNKVAKTKKEAPARTSVTKSTISGNKSSQLKSVNSSSVVIPKANSLPQKKDAAPTVATFAVPVRSSIDVSPSKSDGRFVSMDETTSSCDSIKSPDEVEYLDNRDVSDVDSIQKKIISNLNISDTTEPEGNVCSREIIVELEERVDKIVNIDNIYSDTQLCATYVCDIYKHLRESEEKKRPSTDFMDTIQKDINVSMRAILVDWLVEVAEEYRLVPETLYLTVNYLDRYLSGNAMNRQRLQLLGVSCMMIASKYEEICAPQVEEFRYITDNTYLKEEVLQMESAVLNYLKFEMTAPTVKCFLRRFVRAAAHDVQEIPSLQLECLTNFIAELSLLEYSMLCYPPSQIAASAIFLARFILFPSKKPWNSTLQHYTLYRPSDLCACVKDLHRLCCSSHDSNLPAIRDKYSQHKYKCVAKKCIPPSIPQEVFQS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00181 505 SUPERFAMILY Cyclin-like 231 368 IPR036915 -
Gma13g00181 505 SMART Cyclin_C_2 371 495 IPR004367 -
Gma13g00181 505 CDD CYCLIN 272 361 IPR013763 -
Gma13g00181 505 ProSitePatterns Cyclins signature. 273 304 IPR006671 -
Gma13g00181 505 MobiDBLite consensus disorder prediction 1 79 - -
Gma13g00181 505 Pfam Cyclin, N-terminal domain 242 368 IPR006671 -
Gma13g00181 505 SUPERFAMILY Cyclin-like 371 497 IPR036915 -
Gma13g00181 505 MobiDBLite consensus disorder prediction 90 113 - -
Gma13g00181 505 Gene3D - 242 491 - -
Gma13g00181 505 Gene3D - 256 369 - -
Gma13g00181 505 Pfam Cyclin, C-terminal domain 371 492 IPR004367 -
Gma13g00181 505 PIRSF Cyclin_A_B_D_E 51 502 IPR039361 -
Gma13g00181 505 SMART cyclin_7 375 464 IPR013763 -
Gma13g00181 505 SMART cyclin_7 278 362 IPR013763 -
Gma13g00181 505 PANTHER CYCLIN-A1-1 39 504 - -
Gma13g00181 505 MobiDBLite consensus disorder prediction 1 113 - -
Gma13g00181 505 CDD CYCLIN 369 463 IPR013763 -
Gma13g00181 505 PANTHER CYCLINS 39 504 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00181 Gma-Chr13 10681495 10686067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00181 1 503 Core Cell Cycle Gene Families AT1G44110 59.010 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00181 K06627 - gmx:100776207 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00181 13 10681495 10686067 Gma13g00181 13 10681495 10686067 ECH