Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00156 ATGAAGAAGTTTTCTCTTTATGCTTGTATGCTCAATTTGAGTATCTTGATTCTTCTTCCCTATAGCAAAGCCAGTCAGGCTGATAAACTTCAGGAGTTGATTCTGTCTAAGAGCTCACAGAAGCCTCCAGTGACCCTTTCATGGGCAGAGGAAGACGCAGTGAAAACTCCTTCTCCTGCTTATGTTGCACCCCAAGAGGGTCAAAAGgaagctgacagaattgtggcactgcctggccagccctatggtgtgaattttgaccaatattcaggctatgtcactgttgatccaaaggctggaagagcacttttctattattttgtggagtctccatataacccttcaacaaaacctttagtattgtggctaaatggagGACCTGGTTGTTCCTCATTGGGGTACGGTGCCTTTGAGGAATTGGGACCTTTCAGAATAAACTCTGATGGTGAAACACTCTATCGTAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCCCCTGCTGGAGTGGGCTTTTCCTACTCCAACACTACTTCTGACTATGGTCATTCAGGAGATAAGTCTACTGCAAAAGATGCATATGTTTTCCTGATCAATTGGCTAGAGAGATTTCCAGAGTACAAAACCCGCGATTTTTACATAACTGGAGAGAGCTATGCTGGACATTATGTGCCTCAGCTTGCATACACTATTCTGGTGAACAATAAATTCAGTCAACAAAAGATTAAACTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGTTGCAAGTATAAAGGGGATATATGATTACATATGGACTCATGCTTTGAGCTCAGATCAAACACATGAGCTGATTGAGAAGTACTGCGATGTCACTTCTGAAAACGTTTCAGCTATGTGTGTCAATGCAACAAGAACGGCTGCTATTGAGATCGGAAACATTGACGATTATAACATCTATGCACCACTGTGTCACGATTCTTCTCTCAAAAATGGATCTGCTGGCTCTGTCTATGATTTTGACCCGTGTTCTGATTACTACGGGGAAGCCTATCTAAATAGACCAGAGGTGCAACTAGCTCTTCATGCAAAACCCACAAACTGGGCACATTGCAGTGATTTAATAAACTGGAAGGACAGCCCAGCTACCATCTTGCCGGTCATCAAGTATCTCATTGACAGTGACATTGGATTGTGGATATACAGGCAAGTTCAATTTCTTGGTGATACTGATTCAGTGGTTCCAGTCACATCTTCCAGATATTCAATCAACACCCTCAAGCTCCCTATCCAGGTTCCTTGGCGTCCATGGTATTCTGGAAATGAGTCAATTGCTGAATACGATGTGATTGTGAGAAGTTCTTCTTGGAAGATGTGGATCTTCCTTGCTAATCAGTTGTGTTTAGCTTGCAACGATTTCAATTTGCTGTTTATCCTGAACGTGACAAGCTATTTTGATTCAGCTAAGCAGCTTGTGAATGGGATTCCCCTGCCACTAGATCTTGGATCCAACATTGATGATGTAAAAGTGAAAGTCACCACGGCTGCTGATTCTCTCTCCAAGAAGGCTAAAGAAAATTCAAGGATGATACACAAAGTCATAGATGGAGTGAGACTGGCTCTTGTTACTGTTGCTGTTGTTATGATCTTTGTTGCATTTCTCGGATTGTTATTTTCTTTACTTGCTTTGTCGTGTCCTGTATACTCCTTGGTGGTTATTGGATGGATTCTTGTTACAGGCACCTTGTTACTTTGTGCTGCATTTCTATTTGTCCCTAAGTTTATCAGCAGAGAACCTTTAGTTTCCATTGCTGATCTTACCCTTTTCATTTATGAAGAATTGGCTGTAAATGTCCATTACATGGAATGCTTTGGTTCCTTTGCTCCCATAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAATGGTTTGTAGATGGACAGGCAACATTTGAAGCAATTGCGACTTCAATTCAAGATGCAAACTTTTCTACCTCTCGGTTAGATTCGTTACTAGAAGAAAAGGCTAACCAAGGGGTTCAAATCTATGTGCTTCTCTACAAGGAGGTTTCTCTAGCTTTAAAAATCAACAGCTTGTACAATATGAGAAGACTGTTAAAAATTCATGAGAATGTAAGGGTATTACGCTATCCTGATCATTTTGCTGCTCGTGTTGAGGTCAACGTTTCTAGAAAATCATATTCTACTCAACTGGTTGTCATGGAAGATGAGAATGGGAACCAAAATTCTGCGCCACCTCAAAACGAAGGGTTTCTCATCCCGAATGTATTTACTTTAGCTATACCGCAGGACTTGTCTCATCCTTTCCTTGCCAAGGCAATCAAGTACTTAGATCAACTTGGAATAGCATCCTGCTACAGCACTAAAGTCTATTGCAGGCAGACTTTAATTGGAGGGAACTATGGCCTTCTCAATACCACCACCTTTGCTCCCAATCTTGACTACTACAGTAAGAGGAGCAGGACATCTAGTTCCAAGCTGGCAACCATCACGGGCTCTGACTTTGATCTTCTCATTCCTCTATGGAAGCCTGCCTCCTGCATCACCATGGAAGGGTTTCTAGGCAGATCCATATGTTGA 2598 0.3915 MKKFSLYACMLNLSILILLPYSKASQADKLQELILSKSSQKPPVTLSWAEEDAVKTPSPAYVAPQEGQKEADRIVALPGQPYGVNFDQYSGYVTVDPKAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGETLYRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYGHSGDKSTAKDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNKFSQQKIKLKGIAIGNAWIDDVASIKGIYDYIWTHALSSDQTHELIEKYCDVTSENVSAMCVNATRTAAIEIGNIDDYNIYAPLCHDSSLKNGSAGSVYDFDPCSDYYGEAYLNRPEVQLALHAKPTNWAHCSDLINWKDSPATILPVIKYLIDSDIGLWIYRQVQFLGDTDSVVPVTSSRYSINTLKLPIQVPWRPWYSGNESIAEYDVIVRSSSWKMWIFLANQLCLACNDFNLLFILNVTSYFDSAKQLVNGIPLPLDLGSNIDDVKVKVTTAADSLSKKAKENSRMIHKVIDGVRLALVTVAVVMIFVAFLGLLFSLLALSCPVYSLVVIGWILVTGTLLLCAAFLFVPKFISREPLVSIADLTLFIYEELAVNVHYMECFGSFAPIRGLTEDGSQAQWFVDGQATFEAIATSIQDANFSTSRLDSLLEEKANQGVQIYVLLYKEVSLALKINSLYNMRRLLKIHENVRVLRYPDHFAARVEVNVSRKSYSTQLVVMEDENGNQNSAPPQNEGFLIPNVFTLAIPQDLSHPFLAKAIKYLDQLGIASCYSTKVYCRQTLIGGNYGLLNTTTFAPNLDYYSKRSRTSSSKLATITGSDFDLLIPLWKPASCITMEGFLGRSIC 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00156 865 SUPERFAMILY Phospholipase D/nuclease 636 729 - -
Gma13g00156 865 Gene3D alpha/beta hydrolase 68 326 IPR029058 -
Gma13g00156 865 PANTHER CARBOXYPEPTIDASE 18 447 - -
Gma13g00156 865 SUPERFAMILY alpha/beta-Hydrolases 74 439 IPR029058 -
Gma13g00156 865 Pfam Serine carboxypeptidase 78 440 IPR001563 GO:0004185|GO:0006508
Gma13g00156 865 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 447 IPR001563 GO:0004185|GO:0006508
Gma13g00156 865 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Gma13g00156 865 Gene3D - 384 461 - -
Gma13g00156 865 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Gma13g00156 865 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Gma13g00156 865 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Gma13g00156 865 Gene3D - 343 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00156 Gma-Chr13 8256707 8267346 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00156 624 724 Phospholipase D Gene Family (Wang group) AT3G05630 56.098 8.52e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00156 K16297 - gmx:100807212 899.042