Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00151 ATGCCCTTGAGACGCAAACCACTCCCTTTCATTTCCTCCTATAGCTTTTCTGCCATTTCCCAATCCAAAGCCTCCAACCAGAGAGACTATATTAACTTGTCATACTCATCAACGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATTCACTCCCAAGATGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGCTGGGTACCACCTTGCCTTCTTCAGGAGAAAGATTTATGGGAAAATGCAAAATTTCCCACTTGTATTCAGCAAATTGACTTGCTTCAGAATAGGGAACCCACGAGAAAGAAAATTAGGGGAAGGAAACGAAAACGTAGAAAGCAGTCAAAGATGGGCATGGGTACGAGAACTGCCAAATCAGGTTCTGAAGCTAATGTTGCTTCTGAGCCTGAGGAGAAGTTTGGATTCCAATCAAGGCCAGACTTCACACTTAAAGACTTTTGGCAATATGCTAATGTTTTTAAAGATTCTACTTTGGATTGA 504 0.4187 MPLRRKPLPFISSYSFSAISQSKASNQRDYINLSYSSTEFEDTLGYIAKIHSQDEPYGICRIVPPACWVPPCLLQEKDLWENAKFPTCIQQIDLLQNREPTRKKIRGRKRKRRKQSKMGMGTRTAKSGSEANVASEPEEKFGFQSRPDFTLKDFWQYANVFKDSTLD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00151 167 ProSiteProfiles JmjN domain profile. 30 71 IPR003349 -
Gma13g00151 167 SMART JmjN_1 30 70 IPR003349 -
Gma13g00151 167 MobiDBLite consensus disorder prediction 104 119 - -
Gma13g00151 167 Gene3D Cupin 20 167 - -
Gma13g00151 167 MobiDBLite consensus disorder prediction 104 139 - -
Gma13g00151 167 Pfam jmjN domain 37 64 IPR003349 -
Gma13g00151 167 PANTHER LYSINE-SPECIFIC DEMETHYLASE 38 164 - -
Gma13g00151 167 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 38 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00151 Gma-Chr13 7664799 7665626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00151 36 167 JUMONJI Transcription Factor Family AT2G34880 50.365 4.29e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma13g00151 JmjN 1.9e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00151 - - gmx:100784581 214.927