Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00148 ATGAAGGTGCTGGTGGAGCTGATGGAGGACTTCGAGTCGAACATGGTGGACAAGTCAGCGTACGTGGTGAGCGTGTTGGTGGCAATACCAGAGGCGAGGGTGGCGCTGGTGGAGGAAGGAGGCATGCCGGTGCTGGTGGAGATCATCGAGGTTGGGACGCAGCGGCAAAAGGAAATCACGGTGGTTATTCTCTTACAGGTTAGCGATGACTTTGATGGAGAAGAGCATCACCGTGAAGATGCCGCCAACTCTGACGTCGGCAGCCAAGTCGAAGTAGTCTGCGATGGTGGCGTTCTGGTTGTCGGATTTCTTCTTCGACGGCATATCTTTCCGTGTTGGTTCTTGACTGCGGAGACGCAGTCCATGGCGACGGTAGCCGCCGGAGTCTAA 390 0.559 MKVLVELMEDFESNMVDKSAYVVSVLVAIPEARVALVEEGGMPVLVEIIEVGTQRQKEITVVILLQVSDDFDGEEHHREDAANSDVGSQVEVVCDGGVLVVGFLLRRHIFPCWFLTAETQSMATVAAGV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00148 129 SUPERFAMILY ARM repeat 2 69 IPR016024 -
Gma13g00148 129 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 70 - -
Gma13g00148 129 Gene3D - 1 105 IPR011989 -
Gma13g00148 129 PANTHER U BOX DOMAIN-CONTAINING 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00148 Gma-Chr13 7096897 7097286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00148 1 70 U-box Gene Family AT2G23140 44.286 6.96e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00148 - - gmx:100797550 121.709