Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00146 ATGGCTGAGAAAATGATCAATGTTGTTGCTTCTTCCTCTGGATCTGCTTCTAAGagcctgaatgcaaacaaatggaaagatgctcttactgaagcagcaaatttagttgggttggactCTAAAAATTATAGGAATGATGTTGAATTGCTTAAGGACATTGTTAGAGCTGTTTCGGAAAAATTGCCTCGCAGATACCAAAACCAAAGTAAAGGATTGGTTGGAATTGAGGAACATTATAAACGGATTGAATCATTTCTAAATAATGGGTCTAGTGAAGTTAGAACCCTTGGAATATGGGGCATGGGTGGCATAGGTAAAAGCACCCTTGCTACTGCTTTATATAATGAATTGTCTCCTGAGTTTGAAGGTCATTGCTTCTTCATAAATGTTTTTGATAAGTCTGAAATGAGTAATCTCCAGGGTAAAAGAGTTTTCATTGTCTTGGATGACGTGGCTACCTCTGAGCAATTAGAAAAGCTAATTGGAGAATATGATTTTTTGGGACTAGGAAGTAGGGTCATTGTTACGAGTAGAAATAAGCAAATGCTTAGCCTAGTTGATGAAATATATTCAGTCGAGGAATTGAGCTCTCATCACTCCCTTCAGCTTTTCTGTTTGACTGTTTTTGGAGAAGAACAACCTAAAGATGGATATGAAGATCTATCAAGAAGAGTAATTTTCTATTGCaaagttgttgatgttttgaaacataacaagGGAACTGATGTTGTTGAAGGCATAATTTTAAATCTGCATAAATTAACTGGGGATCTATTTTTGAGCTCCGATTCCCTTGCAAAGATGACTAACCTGAGATTTCTTCGAATCCACAAAGGGTGGCGGAGTAACAACCAATTTAATGTGTTCCTTAGTAATGGTCTTGAGTCATTGTCTAACAAATTGAGGTACCTTCATTGGGATGAATGTTGTCTTGAGTCTTTGCCGTCTAACTTTTGCGCTGAACAACTTGTAGAGATTTCCATGCCTCGTAGCAAGCTCAAAAAGCTCTGGGATGGGGTTCAGAACCTCGTGAGTTTAAAGACCATTGACCTTCAAGAGTCTCGAGACTTGATTGAGATCCCAGACTTATTTATGGCCAAAAAACTTGAAAGAGTATATCTTAATCATTGTAAAAGCTTGTATCAGATCCATCTAAATTCCAAATCTCTCTATGTACTTGACCTCTTAGGTTGTTCTTCTCTCAAGGAATTCACGGTGACATCAGAGGAAATGATAGATTTGATGTTATCTCACACTGCTATATGTACATTGTCATCACCAATTGATCACTTATTGTCTTTAGAAGTGTTAGACCTAAGTGGAACTAATGTTGAGATCTTGCCTGCAAACATAAAAAACCTTTCAATGATGAGAAAGCTAAAATTAGATGATTTCTCGAATCATCAGCCAGGAGTGTGTCGATCACCTTCAGGAGGTGCTTCTAAGCCTTGTAAGTTCAGTCCGACTCGCAGGTACGGATCGCAAACAAAAGCGCCCCGTGCAGATCATGCGCACTCAGGATCTGGTTTGAGGTTAGCGGAATGTGTGCGTGTGGTAACAAGGGCATAA 1569 0.3665 MAEKMINVVASSSGSASKSLNANKWKDALTEAANLVGLDSKNYRNDVELLKDIVRAVSEKLPRRYQNQSKGLVGIEEHYKRIESFLNNGSSEVRTLGIWGMGGIGKSTLATALYNELSPEFEGHCFFINVFDKSEMSNLQGKRVFIVLDDVATSEQLEKLIGEYDFLGLGSRVIVTSRNKQMLSLVDEIYSVEELSSHHSLQLFCLTVFGEEQPKDGYEDLSRRVIFYCKVVDVLKHNKGTDVVEGIILNLHKLTGDLFLSSDSLAKMTNLRFLRIHKGWRSNNQFNVFLSNGLESLSNKLRYLHWDECCLESLPSNFCAEQLVEISMPRSKLKKLWDGVQNLVSLKTIDLQESRDLIEIPDLFMAKKLERVYLNHCKSLYQIHLNSKSLYVLDLLGCSSLKEFTVTSEEMIDLMLSHTAICTLSSPIDHLLSLEVLDLSGTNVEILPANIKNLSMMRKLKLDDFSNHQPGVCRSPSGGASKPCKFSPTRRYGSQTKAPRADHAHSGSGLRLAECVRVVTRA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00146 522 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 231 442 IPR044974 GO:0006952
Gma13g00146 522 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 230 IPR044974 GO:0006952
Gma13g00146 522 SUPERFAMILY L domain-like 259 464 - -
Gma13g00146 522 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 136 IPR044974 GO:0006952
Gma13g00146 522 MobiDBLite consensus disorder prediction 471 505 - -
Gma13g00146 522 Pfam Leucine Rich Repeat 322 341 IPR011713 -
Gma13g00146 522 PRINTS Disease resistance protein signature 176 190 - -
Gma13g00146 522 PRINTS Disease resistance protein signature 95 110 - -
Gma13g00146 522 PRINTS Disease resistance protein signature 341 357 - -
Gma13g00146 522 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 32 136 - -
Gma13g00146 522 Pfam NB-ARC domain 76 123 IPR002182 GO:0043531
Gma13g00146 522 Pfam NB-ARC domain 138 230 IPR002182 GO:0043531
Gma13g00146 522 Gene3D Ribonuclease Inhibitor 234 411 IPR032675 -
Gma13g00146 522 Gene3D Ribonuclease Inhibitor 412 478 IPR032675 -
Gma13g00146 522 Gene3D - 4 57 IPR035897 -
Gma13g00146 522 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 136 230 - -
Gma13g00146 522 Gene3D - 136 193 IPR027417 -
Gma13g00146 522 Gene3D - 58 135 IPR027417 -
Gma13g00146 522 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 231 442 - -
Gma13g00146 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 230 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00146 Gma-Chr13 7075378 7082313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00146 244 471 WRKY Transcription Factor Family AT5G45050 36.134 9.16e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00146 - - gmx:100813640 468.774