Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00125 ATGAATAGGAAAATGCAGAACGAGAAGCAGGACTTGGACTTGGTGATTTCTTCTTCTTCTCTGGACGACGATATCGACTTCATTCTCAGCCAGGACCTGTTTTGCACACCGGATTACCTGACCCCTGATAACAAGTTTCCTGTGAAAGGCTTCGATAGCAACAGTGTCGACTTGGTAAGTGGTAACGTACATATTTCATTTTTACATTTATGTTCATATTTTTATATCTTTTTTTTTCATTTTCTTTTTCAGGAAGAGGAAGATGGCCCTTGCCCCAAGTCACCAGAGAAGAAGCCAAGTACTTCAAAAGGCAAGCGATGCCGAATGGATGATGCTATCTCAGGAGATACTCTCAGTTCTACCTCCTCTGGTGATAATCAGCCAATTGTGGAACTTGGAAATGACTTTGTTGGAGAGTATATTACTGATAAGCCAAAGGCTCGAAACTATGTGTCTCGTTCTGCAGTTGCATTGCGTTGCAGGGTTATGCCTCCTCCTTGTATTAGAAACCCCTTTTTGAAATGCCTTTCAGAAAAGGAAATCGACCCTTTTGAAAGTCAAAGATCAAAATTTGCAGGTATAGTTAGATGTTTGACTTTGTTGGTTCAAAATTTTGGTTTTCACGTGCAACCAACTTTTCTTTGTTATCAGCAAATTGGTATAGGTCACTTCAGCAATGTTTTCAAAGTAATAAAGCGAATAGATGGTTGCTTGTATGCTGTGAAACACAGCACCAGGAAGTTGTGCAAGGAAACAGAAAGTCTTATTGGCATTCTTGTTTTTCTAGGTTCCCATGAGAACATTGTGGGGTACTATTCTTCATGGTTTGAAAATGAACAACTGTATATTCAGATGGAGCTATGTGATCACAGCTTATCCATAAAAAATTGTCCATCATTAGTCACTGCAGGACATGAAATAGAAGCTTTGTATCAGGTTGCCAGTGCATTGCAATTTATCCATAAGAAGGGAATAGCTCATCTTGATGTTAAGCCTGAAAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTACTTGATAATAGCCTTCCAATTGAGGAGGGTGATGCACATTATATGCCTCAGGAAATCCTTAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCCTGGGAGCTTCTATGTTTGAGCTAATTAGCAGCTCGTGTTTGCCAGAACCAGAATCAGGAATTCAGTTCTTTAATCCTAAAGAGGGAAAGGTGCCATTCTTGCCAGGAGTTTCAGTGCAATTTCAAAACTTACTCACGGTCATGATGGACCCCGATCCGGTTAAGCGGCCTTCGGCTACAAAGTTGCTGAAGAGGGTCCTTGAAATGGCAAGAAATTGA 1377 0.3994 MNRKMQNEKQDLDLVISSSSLDDDIDFILSQDLFCTPDYLTPDNKFPVKGFDSNSVDLVSGNVHISFLHLCSYFYIFFFHFLFQEEEDGPCPKSPEKKPSTSKGKRCRMDDAISGDTLSSTSSGDNQPIVELGNDFVGEYITDKPKARNYVSRSAVALRCRVMPPPCIRNPFLKCLSEKEIDPFESQRSKFAGIVRCLTLLVQNFGFHVQPTFLCYQQIGIGHFSNVFKVIKRIDGCLYAVKHSTRKLCKETESLIGILVFLGSHENIVGYYSSWFENEQLYIQMELCDHSLSIKNCPSLVTAGHEIEALYQVASALQFIHKKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSLPIEEGDAHYMPQEILNENYDHLDKVDIFSLGASMFELISSSCLPEPESGIQFFNPKEGKVPFLPGVSVQFQNLLTVMMDPDPVKRPSATKLLKRVLEMARN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00125 458 MobiDBLite consensus disorder prediction 89 109 - -
Gma13g00125 458 Gene3D Transferase(Phosphotransferase) domain 1 298 454 - -
Gma13g00125 458 SUPERFAMILY Protein kinase-like (PK-like) 211 450 IPR011009 -
Gma13g00125 458 ProSiteProfiles Protein kinase domain profile. 213 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00125 458 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 88 366 - -
Gma13g00125 458 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 379 451 - -
Gma13g00125 458 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 24 45 - -
Gma13g00125 458 Pfam Protein kinase domain 217 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00125 458 ProSitePatterns Protein kinases ATP-binding region signature. 219 242 IPR017441 GO:0005524
Gma13g00125 458 Gene3D Phosphorylase Kinase; domain 1 207 288 - -
Gma13g00125 458 SMART serkin_6 213 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00125 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Gma13g00125 458 PANTHER BNAA08G27310D PROTEIN 88 366 - -
Gma13g00125 458 PANTHER BNAA08G27310D PROTEIN 379 451 - -
Gma13g00125 458 PANTHER BNAA08G27310D PROTEIN 24 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00125 Gma-Chr13 4570022 4573103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00125 26 449 Core Cell Cycle Gene Families AT1G02970 53.531 2.12e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Gma13g00125 Pkinase 8.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00125 K06632 - gmx:100784055 739.954