Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00093 ATGCCAAGCCTAGGGAGGTTCGAATTGGCAAACCAGAGCAAGAATGACAAGGATTTGACTCTACTGAAGATGGAATGCCAGAAGGTGGAACTTTATATTCACATTGGATGGCCATTGTATCGCAAATATGGTCATGCTTTTGAGGCTTTCAAAATAATTGTGACTCATCCTGATACTATTTTAAGTACTCTCACTCGTGAAGTTAAAGAAGTTAGCCCAGATGGGCAAAAGTTAAATATTTTTATCAGAGTGACTAAGGTGGTGCCAACTGTATCAGAAGAAGTGAAGGATTATGTTGTGAAGAATACTAGAAGACAAATGACCCCAACCCTTGAAAATTAG 342 0.3889 MPSLGRFELANQSKNDKDLTLLKMECQKVELYIHIGWPLYRKYGHAFEAFKIIVTHPDTILSTLTREVKEVSPDGQKLNIFIRVTKVVPTVSEEVKDYVVKNTRRQMTPTLEN 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00093 113 PANTHER BNAC04G04870D PROTEIN 29 110 - -
Gma13g00093 113 SUPERFAMILY eIF2alpha middle domain-like 24 65 IPR024054 -
Gma13g00093 113 Pfam Eukaryotic translation initiation factor 2 alpha subunit 31 109 IPR011488 GO:0003723|GO:0003743
Gma13g00093 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 29 110 IPR011488 GO:0003723|GO:0003743
Gma13g00093 113 Gene3D Translation initiation factor 2; subunit 1; domain 2 19 80 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00093 Gma-Chr13 2878094 2879739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00093 30 109 Eukaryotic Initiation Factors Gene Family AT2G40290 67.500 4.90e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00093 K03237 - gmx:100805950 130.183