Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00065 ATGTTAGGATTTGACGATGGTGATTCTGATTCCGACAACGAGCAGGCACTGTTTGGGAAGTACCCGGAGCTACAGATGTTTAAGTGGGAGAACAGTCTCATTCACCTTCCTTCCAATTTATCATCTTTGTTATTGCCGCAGACACCACTGTTTCACTGTGAGCGTGAAGAAACCCTCAGGGTTCACCCTCCTCCCTTTCTTCCGTTGCAAGAAACCCTCGATCATCTGTCAGCGAACACTGCCCCTACTCAGGACATCACCCATCTTCAACAGGCACGCCCAGCGAACCCACCCCCCACTTCATCACCATCTCCCAATCTCTGCAAGAGATGGACCAATGAAGAACACAGGCTGTTTCTTGAAGGGCTTGCCTACTTTGGCAAGGGTGATTGGAAGAACATCTCAAAACATGCTGTTAAGACAAGAACCAAGACTCAAGTTGCTACTCATGCCCAAAAATATTTTCTTCACATAAAGGAAAAGGGAAAGGGAAAAAGAAAGAGCCTCTTTGACATGGCCTTGTAA 525 0.4686 MLGFDDGDSDSDNEQALFGKYPELQMFKWENSLIHLPSNLSSLLLPQTPLFHCEREETLRVHPPPFLPLQETLDHLSANTAPTQDITHLQQARPANPPPTSSPSPNLCKRWTNEEHRLFLEGLAYFGKGDWKNISKHAVKTRTKTQVATHAQKYFLHIKEKGKGKRKSLFDMAL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00065 174 Pfam Myb-like DNA-binding domain 109 155 IPR001005 -
Gma13g00065 174 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 159 IPR017930 -
Gma13g00065 174 CDD SANT 110 155 IPR001005 -
Gma13g00065 174 PANTHER TRANSCRIPTION FACTOR KUA1 8 173 - -
Gma13g00065 174 ProSiteProfiles Myb-like domain profile. 110 155 IPR001005 -
Gma13g00065 174 SMART sant 107 157 IPR001005 -
Gma13g00065 174 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 8 173 - -
Gma13g00065 174 SUPERFAMILY Homeodomain-like 110 160 IPR009057 -
Gma13g00065 174 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 110 157 IPR006447 GO:0003677
Gma13g00065 174 Gene3D - 109 160 - -
Gma13g00065 174 ProSiteProfiles SANT domain profile. 106 159 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00065 Gma-Chr13 2085271 2085891 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma13g00065 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00065 - - gmx:121173246 276.174