Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00059 ATGTGGATCTCTGATTCTTCAAAAGGTCTATGCACTACCAGAAAAAGCGTATTCTATGATGGCCAAACGACGAAGCGTCTGGAGTTGCAGTCCCTCCAAATCTGCTCTCATGTTCAGTCCTACCTCATCTTGCACCATGACGACTTCGTGTGCCTCTTCTCCCTCTGCAACAACGTCGTTTCGCAGGCGTGCGAGGTCTTCGAATTCATGGCTCAAGGGTTGAAGGAGTTGAAGGTTGTGTTGAGGATAGGTGGTGAGGATGGACacaacaaagaaaacaacaaagaaaaGAGCTTGTGGGTTCCAAAAACTTGGAGGATTGATGACTCAAAAGCGGCAAAAAGCTCTATAAGGGCAACACTAGGGATTAAAAATGACAAGGCTAACTCAGTTCCTGGGGGAACACTCTTTAAATCCTTCCCTTCAAAGCATGATGAGAACATGATTATGCAAGCCTCGCCGGTCTTGCAGGCCAGTCCAGCGGCATTGTCTAGGGCCCCAAAGATTGATATGTTAGACCTTGAGAGTCTCTTCTTAGCAGAAGTCTTTTCAAGTCCTGCCAAAAAGTCAAATGTGCAAAGCTCAACTGGTCCTAAATATGATAAAGTGAAACTGATTAAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGTCGTTGGATGATTTAATGTTCTTGGTTTTGGCCTGTGGCAAGTCTTGGCACGCCATTGGCTCAATTTTTATCTCTCGGTCAACTTCATGGTTTTGGCTCGTTCTTGCCTTGGCTAGGTCCCCAGTGCTAGGTTATGGCCTCATGCTAAATTTAGGGGCTTATGAGTTTGCCACGTGCTCAGTTTTGGCAGTCATGTCTCGCAAAGAAAACCTCCTATGTGAACTACATACAAAGAAAGGTACTTGGAAGATAGTCGTGCGAATAACTAATATGTGGCATCTTAACAAACATAAAGGTCGACAATCCATTGAGATGGTGTTGATGGACCATACGGGTACAAAGATTGGGGCAACTCTATGGCAAGAATTGTTCCCTGAATTTGAGCCCAAGTTGCGTTGTGGTGGTGCATATGTTATTCAGAACGTGAAGGTTGTTGATACTCATTCTGACTACAAAGTGAGTGCAATTAAATATTTGGTTTATTTTGTGAAGACAACGTCTGTCAAAGAGGTGGACAGACCTGAGATTCCTCCTAATGTTCATGCCATTACTTCATTTGCTGATATAATTTCAGGCGTTGCAAAACCTGATACTTTAGTTGATATTGTGGGTGTTATTGCTGAAGTGATTGAACGCAAAATAGTTAATCCAGCACACAAAGTGACTGTCAAGTTGAGAGACAACAGGTATAAGTTAGTTGTCAAGATGGAACAGAATGGGGAGAAGGCGAACTTCCATTTTTGGGATGTAGTATGTATCAAAATATTTGGTAAAACTGCATATGAATGTCGTCAAGATTTGATTGCGAGTGGTGATGAGATCAAGGTGTTCCCTGCGTGTGTTGATCAATTGTTGGGTAAAACTTGGGATGAACAGTGTATAAGCAACAAGTCAGCCGCTGTTGGTGCTGCATCTTCATCACAACAAGATTACCATCCTACACCTTCATTGTCACAGTCATCTGAATATGATCCTGGAAATGTTGCCTTTGTAACTCCTGCAAAAAGAACATCCGATCAGCAAGGAAGTAGTCAGTTTGATAGTGACGACTTCACAACATATGAACTATCGACCAACAAGCATATAAAAGCTAAGAGTGATATGGGAATATATGAAGGTGTGATGATCACATTTGCTGCGCCGGACAAGAATTGGAAGTTTGATATCCACTTCTCACCGCCACTGCATGCACAGACATGTGGCAGGCCTGTCCATTCTGCCAGAGAATATGTGTTTACTATGGATGTCGATAATTGGATGATTTTTAGACTTTATCCATTGGTAACAGTTTGGCCGAATCAACTTCTTTGGGAGGTCATTGCCAGAAAGCAAACTGTGTGGGACGAGGACGAAGACGACTCCCCATGA 2037 0.4242 MWISDSSKGLCTTRKSVFYDGQTTKRLELQSLQICSHVQSYLILHHDDFVCLFSLCNNVVSQACEVFEFMAQGLKELKVVLRIGGEDGHNKENNKEKSLWVPKTWRIDDSKAAKSSIRATLGIKNDKANSVPGGTLFKSFPSKHDENMIMQASPVLQASPAALSRAPKIDMLDLESLFLAEVFSSPAKKSNVQSSTGPKYDKVKLIKHRRAYNCEIMLSKVKVSLDDLMFLVLACGKSWHAIGSIFISRSTSWFWLVLALARSPVLGYGLMLNLGAYEFATCSVLAVMSRKENLLCELHTKKGTWKIVVRITNMWHLNKHKGRQSIEMVLMDHTGTKIGATLWQELFPEFEPKLRCGGAYVIQNVKVVDTHSDYKVSAIKYLVYFVKTTSVKEVDRPEIPPNVHAITSFADIISGVAKPDTLVDIVGVIAEVIERKIVNPAHKVTVKLRDNRYKLVVKMEQNGEKANFHFWDVVCIKIFGKTAYECRQDLIASGDEIKVFPACVDQLLGKTWDEQCISNKSAAVGAASSSQQDYHPTPSLSQSSEYDPGNVAFVTPAKRTSDQQGSSQFDSDDFTTYELSTNKHIKAKSDMGIYEGVMITFAAPDKNWKFDIHFSPPLHAQTCGRPVHSAREYVFTMDVDNWMIFRLYPLVTVWPNQLLWEVIARKQTVWDEDEDDSP 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00059 678 Gene3D Formin, FH2 domain 124 242 IPR042201 -
Gma13g00059 678 SUPERFAMILY Formin homology 2 domain (FH2 domain) 167 245 - -
Gma13g00059 678 Pfam Domain of unknown function DUF223 327 422 IPR003871 -
Gma13g00059 678 CDD RPA1_DBD_A_like 306 391 - -
Gma13g00059 678 Gene3D - 294 396 IPR012340 -
Gma13g00059 678 SUPERFAMILY Nucleic acid-binding proteins 295 395 IPR012340 -
Gma13g00059 678 Gene3D - 431 526 IPR012340 -
Gma13g00059 678 MobiDBLite consensus disorder prediction 527 548 - -
Gma13g00059 678 PANTHER CYCLIC DOF FACTOR 2 85 166 IPR045174 GO:0003700|GO:0006355
Gma13g00059 678 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 85 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00059 Gma-Chr13 1872079 1886315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00059 164 238 Protein tyrosine phosphatase (PTP) family AT5G58160 62.338 7.34e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00059 - - gsj:114368235 357.066