Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00041 ATGGCGTCGAAGGTGGCGCTGATGGCGCTGTTCTCCGTCGCGCTCCTGTTCTCTCCGTCGCAATCCGCGGTCTTCAGCGTAGATCTAGGCTCCGAATCGGTGAAGGTGGCGGTGGTGAACCTCAAGCCCGGCCAATCCCCGATCTCCGTCGCGATCAACGAGATGTCCAAACGCAAATCGCCGGCGCTGGTCTCCTTCCATGACGGCGACCGCCTCCTCGGAGAGGAGGCCGCCGGCCTCGCCGCGCGCTACCCGCAGAAGGTCTATTCCCAAATGCGCGACCTCATCGCCAAACCCTACGCCTCCGCGCAGAGGATTCTCGACTCAATGTACTTGCCATTCGATGCAAAGGAAGATTCACGAGGCGGCGTGAGTTTCCAAAGCGAAAACGACGACGCTGTTTATTCCCCCGAGGAGCTGGTTGCCATGGTGTTAGGTTACACGGTGAATTTGGCAGAGTTTCACGCAAAGATTCAGATAAAGGACGCGGTGATCGCGGTGCCGCCGTACATGGGGCAGGCGGAGCGGAGAGGGCTGCTTGCCGCGGCGCAGTTAGCGGGGATTAACGTTTTGTCTCTGATAAACGAGCATTCCGGCGCGGCGCTGCAGTACGGGATCGACAAGGACTTCTCCAACGAATCTCGGCACGTGATCTTCTACGACATGGGCGCGAGCAGCACCCACGCGGCGCTCGTTTACTTCTCGGCGTACAAGGGGAAGGAGTACGGGAAGAGCGTGTCGGTGAATCAGTTTCAGGTGAAGGACGTGCGCTGGGATCCGGAGCTCGGTGGCCAGCACATGGAGCTGCGGTTGGTGGAGTATTTTGCGGATCAGTTCAATGCGCAGGTTGGAGGTGGAATCGATGTCAGGAAGTTCCCCAAGGCTATGGCTAAGTTGAAGAAACAGGTTAAAAGGACTAAAGAGATACTTAGTGCTAACACAGCAGCTCCTATTTCAGTTGAATCGCTTCATGATGACGTCGACTTCAGGAGCACAATAACCCGTGAGAAATTTGAAGAGCTTTGTGAAGACATTTGGGAAAAATCGCTCTTACCTGTGAAAGAGGTGCTTGAGAATTCTGGCCTGTCATTGGAACAAATATATGCAGTGGAGTTGATTGGAGGTGCCACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAATTCCTCAGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGCGCAGCTCTGCATGCTGCAAATTTAAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGATTGATGGTTCCTTATATGGATTTGTGGTTGAGTTGAATGGTCCTGATCTTTTAAAAGATGAAAGCTCTAGGCAGCTACTTGTGCCACGAATGAAGAAGGTCCCGAGTAAGATGTTTAGATCCATTAATCATAACAAGGATTTTGAAGTTTCACTTGCTTATGAAAGTGAGAATCATTTGCCTCCTGGTGTTACCTCTCCTGAAATTGCTCGATACCAGATATCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGGAATCTGTCATCCCCCATCAAGACAAACATACATTTTTCTCTTAGTAGAAGTGGAATTCTTTCACTGGATCGGGCTGATGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCTAGAAAGAATTTGACCATAGAGAATTCAACCGTTTCATCAAATGTTTCAGCTGAATCTGCTGCGGGTAATAGTTCTGAAGAAAACAACGAAAGCGTGCAAACTGATAGTGGGATTAATAAGACATCCAACATTAGTTCAGAGGAGCAAGCTGCTGCTGAGCCTGCTACAGAGAAAAAGCTGAAAAAGCGGACCTTTAGGGTACCATTAAAGATTGTAGAGAAGATAACTGGATTTGGAATGTCTCTATCACAAGATTTTCTTGCTGAAGCCAAAAGAAAACTACAAGTACTAGATAAAAAAGATGCAGACAGAAAAAGAACAGCTGAGTTAAAAAATAATTTAGAAGGATATATATATACAACTAAGGAAAAGATTGAAACTCTTGAGGAGTTTGAAAAAGTTTCTACAAGTGAGGAACGCCAGTCCTTCATTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCCACAGAGTTTCAAGAGCGTCTAGATCAGTTAAAAGCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGGCCAGCAGCAGTTGAGCATGCTAATAAATACATTGATGAGTTGAAACAGATTGTTGAGGAGTGGAAAGCAAAGAAGTCTTGGCTTCCACAAGAACGAGTAGACGAGGTCATAAAAAGTTCTGAAAAATTGAAGAATTGGTTGGATGAGAAAGAAGCTGAGCAAACAAAGACTTCTGGATTCAGTAAGCCAGCATTTACATCTGAAGAAGTATATCTGAAGGTGCTTGATCTGCAAACCAAGGTTGCCAGTATTAATAGAATTCCCAAGCCCAAACCTAAGGTTCAGAAGCCCGTAAAAAATGAAACCGAAAGCAGTGAGCAGAATACAGAGAATTCTGATTCTAACTCAGCTGATAGTTCCTCTTCAAGTGATTCATCCGTTAACAGTTCAGAAGGCACAAGCGAAGAGACGGTAACTGAGCAAACTGAAGGTCATGATGAGCTATGA 2676 0.463 MASKVALMALFSVALLFSPSQSAVFSVDLGSESVKVAVVNLKPGQSPISVAINEMSKRKSPALVSFHDGDRLLGEEAAGLAARYPQKVYSQMRDLIAKPYASAQRILDSMYLPFDAKEDSRGGVSFQSENDDAVYSPEELVAMVLGYTVNLAEFHAKIQIKDAVIAVPPYMGQAERRGLLAAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGASSTHAALVYFSAYKGKEYGKSVSVNQFQVKDVRWDPELGGQHMELRLVEYFADQFNAQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHDDVDFRSTITREKFEELCEDIWEKSLLPVKEVLENSGLSLEQIYAVELIGGATRVPKLQAKLQEFLRRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMIDGSLYGFVVELNGPDLLKDESSRQLLVPRMKKVPSKMFRSINHNKDFEVSLAYESENHLPPGVTSPEIARYQISGLTDASEKYSSRNLSSPIKTNIHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTIENSTVSSNVSAESAAGNSSEENNESVQTDSGINKTSNISSEEQAAAEPATEKKLKKRTFRVPLKIVEKITGFGMSLSQDFLAEAKRKLQVLDKKDADRKRTAELKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFIEKLDQVQDWLYTDGEDANATEFQERLDQLKAVGDPIFFRLKELTARPAAVEHANKYIDELKQIVEEWKAKKSWLPQERVDEVIKSSEKLKNWLDEKEAEQTKTSGFSKPAFTSEEVYLKVLDLQTKVASINRIPKPKPKVQKPVKNETESSEQNTENSDSNSADSSSSSDSSVNSSEGTSEETVTEQTEGHDEL 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00041 891 MobiDBLite consensus disorder prediction 564 603 - -
Gma13g00041 891 Gene3D - 209 396 - -
Gma13g00041 891 SUPERFAMILY Actin-like ATPase domain 214 416 IPR043129 -
Gma13g00041 891 Pfam Hsp70 protein 25 735 IPR013126 GO:0005524|GO:0140662
Gma13g00041 891 MobiDBLite consensus disorder prediction 844 880 - -
Gma13g00041 891 ProSitePatterns Heat shock hsp70 proteins family signature 3. 370 384 IPR018181 -
Gma13g00041 891 CDD HYOU1-like_NBD 26 414 - -
Gma13g00041 891 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 424 572 IPR029047 -
Gma13g00041 891 PRINTS 70kDa heat shock protein signature 23 36 - -
Gma13g00041 891 PRINTS 70kDa heat shock protein signature 55 67 - -
Gma13g00041 891 PRINTS 70kDa heat shock protein signature 163 183 - -
Gma13g00041 891 PRINTS 70kDa heat shock protein signature 367 383 - -
Gma13g00041 891 PRINTS 70kDa heat shock protein signature 399 419 - -
Gma13g00041 891 SUPERFAMILY Actin-like ATPase domain 24 208 IPR043129 -
Gma13g00041 891 PANTHER HSC70CB, ISOFORM G-RELATED 9 866 - -
Gma13g00041 891 Coils Coil 747 767 - -
Gma13g00041 891 PANTHER BNAC07G50110D PROTEIN 9 866 - -
Gma13g00041 891 Gene3D - 27 414 - -
Gma13g00041 891 MobiDBLite consensus disorder prediction 564 611 - -
Gma13g00041 891 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 662 744 IPR029048 -
Gma13g00041 891 Gene3D - 90 143 - -
Gma13g00041 891 Gene3D Actin; Chain A, domain 4 263 348 - -
Gma13g00041 891 Gene3D - 635 749 IPR029048 -
Gma13g00041 891 MobiDBLite consensus disorder prediction 827 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00041 Gma-Chr13 1185583 1194939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00041 2 541 Miscellaneous Gene Families AT5G28540 27.437 3.41e-62 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00041 K09486 - gmx:100786898 1628.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00654 20 25067382 25076261 Gma13g00041 13 1185583 1194939 GST