Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00024 atGACCACTTTCCACGTTGTCGAGAAAGATCTAACCTCCAGATACGCGCGGTACGATGAATTGTTGGGGAAAGGAGCCTTCAAGACTGTATACAAAGCGTTTGACGAAGTGGACGGAATCGAAGTTGCTTGGAACATGATCAGCGTTGAGGACGTTGTGCAGACGCCGCAGCAGCTGGAAAAATTGTACTCGGAGATTCACCTGCTCAAGTCCTTGAAACACGACAATGTCATCAAGTTGTATAATTCTTGGGTCGATGATACCACCGGCACCATCAACATGATCACCGAATTGTTCACCTCCGGAAGTTTGAGGCAGTACCGGAATAAGCATAAGAATGTGGATATGAAAGCCATCAAGAACTGGGCGCGTCAGATTCTCCGCGGCTTGTGCTTTCTGCACTGTCACAGTCCTCCTATTGTTCATAGGGACCTGAAATGTGATAACATTTTTGTCAATGGGAATAGTGGACTGGTTAAGATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCAACTGCCCGGAGTGTCATTGGTACACCGGAGTTTATGGCCCCAGAGCTTTATGAGGAGGAATACAATGAACTTGTTGACATATATTCCTTTGGCATGTGCATCTTAGAAATGGTCACCTGCGAGTACCCGTACAGTGAATGTAATAATCCTGCACAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCCAAAGTAAATGATCCTGAAGTGAAGCAATTCATCGAGAAGTGTCTAGTTCCAGCATCTATGAGATTGTCTGCATCTGAACTACTGAAAGACCCATTCCTTGCAACTGAAAACACAAAGGAGATTAATCATGATATACTGGAGCTGCCTAATCCTCACACCAAATTGGTGAATCCACCAACATGTGAGCCTCATCCCATGGAGATAGATTCTAAATCCAGGCGTACTTCACCTGGCTCCTCCATGGGAAGAATTGAAGAAACTTCTCAAGTTTCATTTTTTGATCTTGTGAGGATGACCGAGAATAACAAATTTATGCTAAGAGGGGAGAAAAATGCTGAAAGTACAATTTCACTCACACTGAGAATTGCAAATGCTTGTGGTGGAGCGAGGAATATCCATTTCCCATTCTATATCAATTCTGATACAGCAATTTCCATTGCTGAGGAGATGGTGGAACATCTGGAACTCACAAATGAGGATGTATCTGTCATTGCAGAGCTAATAAATGACATGATTGCTAAGCTTGTCCCCAACTTGAAACCCTTAAGTGAGAAACTCTCATCCGGAACAGATCAATTGTACAGGCCTTCTTCGGAAGTTCAGAATGGTGAACAATTCAACTGCCACTGGCCATTACAATCAAGTGATTATGATATGAAGCCTGTGTTTAAGGATCTAGTTCACTCATGGCCTGTTGACGGGGATGATCTGGAGAAACAAGAATCTGTTATGTCAGATATATCAGTGGAGTGTGGGATAACAGTTGCCTCAGATTCTAAAGTTGTAGAGCCTGACATTTTTATTTTTGATGAATTCTGGGAGGGGTTTGATGCATTCAATTCCACTTCAGATGTCAGGTTTTGTGGGCAAGAGGATGGACACAAGAATCAATCAGAGAACTCATCAGGCTCTTTAATCAATTCATGTTGCTGCCCATTCAAAAACTTTGACATATCAAGTATATGTTCTCTTACTCTAGCTGACAAAGATCCTTCAGAAGGGCTGCGGTTGGAAATTGAAGCAATAGATACATACTTTGAACAACGCTTTCGTGAGCTTGAGATGATGAGGGTGGCAGCCATAGAAAGTTTGAAGAGGAGACATGGCGAGAAACATACCTGTGATGTGATGCATTAG 1857 0.4281 MTTFHVVEKDLTSRYARYDELLGKGAFKTVYKAFDEVDGIEVAWNMISVEDVVQTPQQLEKLYSEIHLLKSLKHDNVIKLYNSWVDDTTGTINMITELFTSGSLRQYRNKHKNVDMKAIKNWARQILRGLCFLHCHSPPIVHRDLKCDNIFVNGNSGLVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTCEYPYSECNNPAQIYKKVTSGIKPAALAKVNDPEVKQFIEKCLVPASMRLSASELLKDPFLATENTKEINHDILELPNPHTKLVNPPTCEPHPMEIDSKSRRTSPGSSMGRIEETSQVSFFDLVRMTENNKFMLRGEKNAESTISLTLRIANACGGARNIHFPFYINSDTAISIAEEMVEHLELTNEDVSVIAELINDMIAKLVPNLKPLSEKLSSGTDQLYRPSSEVQNGEQFNCHWPLQSSDYDMKPVFKDLVHSWPVDGDDLEKQESVMSDISVECGITVASDSKVVEPDIFIFDEFWEGFDAFNSTSDVRFCGQEDGHKNQSENSSGSLINSCCCPFKNFDISSICSLTLADKDPSEGLRLEIEAIDTYFEQRFRELEMMRVAAIESLKRRHGEKHTCDVMH 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00024 618 SUPERFAMILY Protein kinase-like (PK-like) 18 319 IPR011009 -
Gma13g00024 618 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00024 618 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Gma13g00024 618 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Gma13g00024 618 MobiDBLite consensus disorder prediction 292 322 - -
Gma13g00024 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gma13g00024 618 SMART serkin_6 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00024 618 Gene3D - 354 441 - -
Gma13g00024 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 612 - -
Gma13g00024 618 ProSiteProfiles Protein kinase domain profile. 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00024 618 CDD STKc_WNK 14 273 - -
Gma13g00024 618 PANTHER WNK KINASE 4 612 - -
Gma13g00024 618 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 356 412 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00024 Gma-Chr13 671480 674365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00024 7 607 MAP Kinase Kinase Kinase AT5G41990 50.083 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma13g00024 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00024 K08867 - gmx:100783717 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00663 20 25705318 25708160 Gma13g00024 13 671480 674365 GST