Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00021 ATGGGAGGGTACTCTACGAACCCCGCGGACTACAAGCTTCTAGAAGAAGTTGGTTATGGAGCCACCGCCACCGTCTACAGAGCGATCTATCTCCCCTTCAACCAACTGGTGGCCATCAAGTCCTTCGATCTCGATCGCTGCAACGTCAATCTCGACGACCTGCGCAGGGAGGCCCAAACCATGAGCCTCATCGACCACCCCAACGTGGTGAGGGCGCTCTGCTCCTTCGCCGTGGACCGGAGCCTCTGGGTGGTCATGCCCTTCATGGACCAGGGCTCCTGCCTCCACCTCATCAAGATAGCTTACTCCCACGGCTTCCATGAAGACGTTATCGGATCCATCCTCAAGGAGACTCTCAAGGCCCTCCACTACCTCCACCGCCACGGCCACATTCACGGCGACGTCAAGGCCGGTAACATTCTACTCGACACCTCCGCCTCCGTCAGGCTCGCCGACTTCGGCGTCTCCGCTTGCTTGTACGACAACGCCGGCGACCGTCACCGTTCCAGAAACACTTTTGTTGGAACCCCTTGCTGGATGGCTCCTGAGATGCTGCAACCTGGAAGTGGCTATAATTCCAAGGCCGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGCCATGCTCCATTTTCAAAATATCCTCCAATGAAGGTTCTCCTAATGACAATACAGAATGCCCCTCCTGGACTTGATTATGATCGAGATAAAAAGTTCTCTAAGTATTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGCTAAGCCTCCCGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTCAAAGATGCAGCACAACTAGCAGTGAAGAAAATGCCTTCTACAGAAGAAGAGGCAATATCTCGGAGTCAATATCAACGAGGAGTTAGCTCGTGGAATTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGGATGATGATGATATTGCAGAGATGAGGGAAGAAGCTGAAAAGAAATTTTTTACTAATTACAAGGCCATTGCAATTGATTCCCAGTCTGGTACTGTCAAAATGAATTCAGAGAAATCACCACAGAATAAAATCACATCACAGGTAGGTGCTTTTGACATAAAACAGACTGAGCAGGATGAATACTTGAACAAAAAGCAGAAGAATCCCAAAAGTGATCTCCAGGAACCTGGATTGCCCAAAAATATTATTTGGAAGAGAAATGGGTCAATTACGGAGGCAACAACATCTACTCTAGAGAAAGATATAGGTATGTGCAAAATCAAAGGTCAATCCAGGAAAATCCGTCAAACCCAAAGTGGACCGCTGTTGCCAGGCACTGTTCTCAGTCATTCTGCATTAGAAAGGGGACGAACATTAGAAAGGCTTGAGAATGGAAATCAGTTACTGGGTGAGAAAAATAACCATGAAGCGCGACGAGCGCCAAGTTTTAGTGGTCCATTGATGCTTCCAATGCGAGCTTCAGCAAATAGTTTATCGGCTCCAATAAAGTCTTCTGGAGGATTCATAGATTCCTTGGATGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTGACATCAGAAAATTTAGATCTTGTGAAGGATATTCCCGTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCAGTATCACCACTGCAGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGTCCACCAAAGATTCTATCACCAACGGTATCTCTGCATCATTTCTTACAACTCACCTTCAAAATCTTTTACAGCAAACATCTATTCAACAAGATCTTATAATGAATCTGTTAAATAGCTTGCAATCTGCTGAAGCAATTGAAGTTTCACAGAATGGGAAGTTGCCACCATTACCTCGCAGTTCAGAAATCAATGGAAGTGTTGATACAGCAGCTTCAGAGAGGGAACGTCTTCTGCTGCTCAAAATTTCAGAGCTTCAGACTCAGATGATCACTTTGACTGGTGAGCTGACAGCTGAGAAGTTAAAACACATGCAGTTGCAACAACAGCTAATTCTCTACAGTCAGGAACAAAATAGGGACAAGAGAGATGAAGTTGCATGA 2184 0.4533 MGGYSTNPADYKLLEEVGYGATATVYRAIYLPFNQLVAIKSFDLDRCNVNLDDLRREAQTMSLIDHPNVVRALCSFAVDRSLWVVMPFMDQGSCLHLIKIAYSHGFHEDVIGSILKETLKALHYLHRHGHIHGDVKAGNILLDTSASVRLADFGVSACLYDNAGDRHRSRNTFVGTPCWMAPEMLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKYFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSTEEEAISRSQYQRGVSSWNFDIDDLKAQASLVRDDDDIAEMREEAEKKFFTNYKAIAIDSQSGTVKMNSEKSPQNKITSQVGAFDIKQTEQDEYLNKKQKNPKSDLQEPGLPKNIIWKRNGSITEATTSTLEKDIGMCKIKGQSRKIRQTQSGPLLPGTVLSHSALERGRTLERLENGNQLLGEKNNHEARRAPSFSGPLMLPMRASANSLSAPIKSSGGFIDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSVSPLQKSASVSDWMLDSKQMSTKDSITNGISASFLTTHLQNLLQQTSIQQDLIMNLLNSLQSAEAIEVSQNGKLPPLPRSSEINGSVDTAASERERLLLLKISELQTQMITLTGELTAEKLKHMQLQQQLILYSQEQNRDKRDEVA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00021 727 ProSiteProfiles Protein kinase domain profile. 11 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00021 727 SMART serkin_6 11 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00021 727 SUPERFAMILY Protein kinase-like (PK-like) 10 331 IPR011009 -
Gma13g00021 727 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 718 - -
Gma13g00021 727 Gene3D Transferase(Phosphotransferase) domain 1 92 325 - -
Gma13g00021 727 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Gma13g00021 727 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 718 - -
Gma13g00021 727 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Gma13g00021 727 CDD STKc_OSR1_SPAK 10 273 - -
Gma13g00021 727 Pfam Protein kinase domain 11 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00021 Gma-Chr13 630832 639567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00021 3 715 MAP Kinase Kinase Kinase Kinase AT4G24100 62.535 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma13g00021 Pkinase 2.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00021 - - gmx:100809903 1405.58