Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00016 ATGAAGTTTAACCCTAGGGTTTCCTTAAGTCGTCGCAAGAGCCACAATGTTCACTTCATTGTTCCATCGAGCGTGCGCCGCGTCTTGATGAGCACGTCTCTCTCCATTGATCTTCGGTCGAAGTACAACGTGCGATCCATTTCAGTTCGCAAGGACGACGAGGTTAATGGCTCCAAGTCTATCGTCGCAAGTGGGTCATCCACATTGAGCACATCACCCGCGAGAAGGTTAACGCTAACGTTGGGATTCACCCTTCCAAGATTGACGTCACCAAACTTCGAATGGACAAGGACAGCAAATCCTTGCTCGATCGAAAGGCCAAGGGTTGTGCCACTGCCGACAAGGAAAAAGGTACCAAGTATGACCACATACACAACTTGGTACATGACCATTGCAGCCATTGCTCATGGCCAGACTATTAATGCTTTAAAAGTAATAATTGTGCCACTGATTGCCTgttcttcttgttgGTGTTACCTTTCTTTTCTTTCAGCTGCTGCTTGTTACCTAGCTGTTGTGATTGCCTTTCCCTTGAAGAATGTTTGCAGGAGACCACTAGAACCTACATTAGTCTTTAATTTGATCCAATATGGAGGTGGAGGCATCCAGCAAgctgccacacaatccCTTGAGTTGTGGAACTCAACGATTGCTTCTGCTTATGGATTTCATGGTCAAGGACAAGAAGCAATCAAGGTTTTCAATGAGATGGAACAAGAAAATCTGCCAGAAAGTGAAGTAATATTCTTAAGATGGCTAACCAAAGAGGAAATGGGTTTTGATGACGTGTCTTGCGGAGGGACATTTGCTGTATGTGAATTTTGGAAGTTTGTATAG 837 0.4313 MKFNPRVSLSRRKSHNVHFIVPSSVRRVLMSTSLSIDLRSKYNVRSISVRKDDEVNGSKSIVASGSSTLSTSPARRLTLTLGFTLPRLTSPNFEWTRTANPCSIERPRVVPLPTRKKVPSMTTYTTWYMTIAAIAHGQTINALKVIIVPLIACSSCWCYLSFLSAAACYLAVVIAFPLKNVCRRPLEPTLVFNLIQYGGGGIQQAATQSLELWNSTIASAYGFHGQGQEAIKVFNEMEQENLPESEVIFLRWLTKEEMGFDDVSCGGTFAVCEFWKFV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00016 278 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 63 IPR005756 GO:0003735|GO:0006412|GO:0015934
Gma13g00016 278 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 56 IPR005756 GO:0003735|GO:0006412|GO:0015934
Gma13g00016 278 PANTHER 60S RIBOSOMAL PROTEIN L26-1-RELATED 1 56 - -
Gma13g00016 278 SUPERFAMILY Translation proteins SH3-like domain 9 55 IPR008991 -
Gma13g00016 278 Gene3D - 1 58 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00016 Gma-Chr13 528471 532918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00016 1 55 Cytoplasmic Ribosomal Protein Gene Family AT5G67510 72.727 1.22e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00016 K02898 - gmx:100788996 87.8113