Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02260 atgaccatggccatgcccCTGTTTCTGATGTTCCTTCTTCTGCACATAGCTTGGGTGGCATCGTCGGATCTCCGACCTGGGTTTTACTCAAAAACATGTCCAAAAGCGGAACTCATAGTCCGAGATGTGATGAAGAAGGCCCTTATGAGGGAACCCAGAAGTGTTGCCTCTGTTATGCGCTTCCAGTTCCATGATTGCTTTGTCAACGGGTGTGATGGTTCTATGTTGCTTGATGATACACCAACGATGCTGGGGGAGAAATTGGCCCTCTCAAATATAAATTCGCTGAGATCGTATGAAGTTGTCGATCAAGTGAAGGAAGCGCTCGAGAAGGACTGCCCCGGAGTGGTTTCCTGTGCTGACATCATAATTATGGCATCTAGAGATGCTGTCTCTCTGACAGGTGGACCTGAGTGGGAGGTGAGGTTGGGAAGATTGGACAGCTTGAGTGCTAATCAAGAAGACTCAAACAACATCATGCCAAGCCCAAGAGCCAACGCAAGCTCTCTTATTGATCTCTTCCAGAAATATAACCTTACTGTGAAAGACCTAGTAGCACTCTCAGGATCTCACTCTATTGGCCAAGGTCGTTGTTTCTCCGTCATGTTTAGGCTATACAATCAATCTGGAACTGGAAGGCCTGACCCTGCCATTGACCCTAGCTATAGACAATACCTTAACAGGCTATGTCCACTGgatgttgaccaaaatgtcacagggaaccttgattccacgcctctcgtctttgataaccAATATTTCAAGGACTTGGCTGCTAGGAGGGGCTTTCTCAATTCTGATCAAACACTCTTCACATTCCCCCACACAAGGGAGTTTGTGAGGTTATTTAGTAGACGCAAAACTGAGTTTTTCAAGGCATTTGTGGAAGGAATGTTGAAAATGGGTGACTTGCAGTCTGGTCGACCTGGGGAAGTTAGGACTAACTGCAGGCTCGTCAATGCTCGCCCGATTAATTTGCTGCTTCAGTCTCCACACAACATGGAGAGTAACGATAAATAA 1020 0.4284 MTMAMPLFLMFLLLHIAWVASSDLRPGFYSKTCPKAELIVRDVMKKALMREPRSVASVMRFQFHDCFVNGCDGSMLLDDTPTMLGEKLALSNINSLRSYEVVDQVKEALEKDCPGVVSCADIIIMASRDAVSLTGGPEWEVRLGRLDSLSANQEDSNNIMPSPRANASSLIDLFQKYNLTVKDLVALSGSHSIGQGRCFSVMFRLYNQSGTGRPDPAIDPSYRQYLNRLCPLDVDQNVTGNLDSTPLVFDNQYFKDLAARRGFLNSDQTLFTFPHTREFVRLFSRRKTEFFKAFVEGMLKMGDLQSGRPGEVRTNCRLVNARPINLLLQSPHNMESNDK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02260 339 Pfam Peroxidase 40 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Gma12g02260 339 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Gma12g02260 339 PANTHER PEROXIDASE 72-RELATED 9 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PANTHER PEROXIDASE 17 9 321 - -
Gma12g02260 339 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 Gene3D - 27 320 - -
Gma12g02260 339 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 Gene3D Peroxidase, domain 2 161 301 - -
Gma12g02260 339 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g02260 339 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02260 Gma-Chr12 43566790 43570179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02260 5 330 Peroxidase AT2G22420 71.166 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02260 K00430 - gmx:100796737 673.7