Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02253 ATGGATGCCACTCACTCCATGTTCTGTAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTTGTGTCACACGTCTTCAACGTTGTGTTTAGGACAGTGGGCCAACCTGGACCAATTGCACAAATTCTGGCTGGGTTAGTGCTAGGTCCAATGTCACATATAGAGTATATAAAGGCTACATTCTTTCCTGCCAGTTCAATAAATTACTATGAAGTTGTGAGCTACTTCTGTCGCATACATTTCATGTTTTTATTTGGGTTGGAGATGAATATTCACTACACCATGCGCAATCTACGTATAGTCAGCTTAGTAGCCTGTGGTGGTGCAATAATGGGTGGTGTGTTTGGTCTATCTGTCTCATTTTACTTGCATCAACAGCTAAACACCATTGACAATGCCCCCTTGTATTATTTTTGTATGATCATTATGCTAGTGGTGTCATACACAAGCTCGCCTATGGTGATTCGTTTGGCAGCAGAGTTAAGGTTTGCAGCATCAGATGTGGGGCGAATCGCAGTTTCTTCTGCATTGATAACAGAAATGGGGTGCTTGTTGTTGTTCAATGTGATGGTTAACTGGAGAAAACCAAATCACATTTCTGCTGGTTTCGGTTGCCTTGTAATTACTGCCTTGGTGGTTATCATAAACAGGTACTTAGCCGTTTGGTTAAACACAAGAAATACAAACCAGAAGTACCTCAAGGCTCCTGAGTTGATGCTCATTCTGCTCCTGCTCCTAACTTGCTCAATGATAATAGAAATTTGGGGTTACAACAGTATTATTAGTTGTTTCATCATTGGTTTGTTGTTTCCTAAGGAAGGTAAAACAGCTAGAACATTGCTGCATAAACTTGGTTATTCTATTTACAACTTTGTACTTCCAGTATATTTTGGGTACTTAGGCTTACAGTGTGATCTGATAAATGTCTTCAAGAGCCTGGAGAGGGCAATCAATATGGCCATATTGATATTGTTGAGCATTGGAAGCAAGCTTGGTGGTACTCTTATAGTTTGCCGCTACCTTAAAATTCCTACTAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCTGATCTTCTATTCATAGGTGCAGCAGCAAAGCAAGTAATTACTTTTGATTCAGAGGCGTACAATGTTTTGTTGGTATCAATAGTACTTAACACAATAATATCAGGAGTAATTGTGGCTTTTCTAGTAAGAGGGGAAGAAAAAATGTTTGCAAACAACCATACAGCAATTGAGCCACAGCAAATGGAGGACGAGCTTCGAATTCTGGCTTGTGTGTATGACCCTCGTCAGGTATCTGCCATACTTGCCACAGTACTAGCGATACATGGCTCTAGAGTATCACCATCTACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACCTGTTATACCATGAGAAAGAAAATGCTGACCTTAGCGACGACGAGGACTATGGAGGCAATGATGTGGTGGAAATTAACAATGCTTTGGATAACTTCACTGCAGAAACAAAGATTCTAGTCCAACAAAGAAGGGCAGTATCTCCTTTCCCATCTTTGTATGAAGATGTGTGCAATGAAGCAGAAGATCTCCAAGTGTCCATAATTCTACTCCCCTTCCACAAGCACCAACGCATTGATGGGAAATTAGAAAGTGGGAAAGAGGGTATAAGGATCACTAACCAGAAGGTGCTAAGACATGCCCCTTGTTCAGTTGGTATCATAGTAGAAAGAGGACTTGCAAGGGTACCAGGCTTCTCACAACTAGTAGCATCTGAAGCCATACAAAATGTTGCAACACTTTTCTTTGGTGGCCCTGACGACCGCGAGGCTATTGCGTGGAGCCTACGCATTTCAGGGAGTCCGCGTGTCAACTTGACAATCATTAGATTTCTGTTGAGTTCCTCATCACAGAATGAAATTATTGAGAGTGGAGAATCTGAGGACAAAGAGATCTTGATGTCATTGTCTGGGGAGGAGACGGTGAATGAGATTGACAACACCTTCATGGTTGATTTCTACAACAGGTACGTGACTTCTGGCCAAATAGGGTATGTGGAGAAGTTTGTGAAGGATGGTGCACAGACAGTGGAATCTCTGAAAGAGATAGGGGACATGTACTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGACAGAGTTCATTGACAATTGGGATGAGTGACTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGCTCAGTTTTGATCGTTCAACAACACAGAGATGCCAAGAAAGCCCTATTGCATGCTTAG 2349 0.4181 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHVFNVVFRTVGQPGPIAQILAGLVLGPMSHIEYIKATFFPASSINYYEVVSYFCRIHFMFLFGLEMNIHYTMRNLRIVSLVACGGAIMGGVFGLSVSFYLHQQLNTIDNAPLYYFCMIIMLVVSYTSSPMVIRLAAELRFAASDVGRIAVSSALITEMGCLLLFNVMVNWRKPNHISAGFGCLVITALVVIINRYLAVWLNTRNTNQKYLKAPELMLILLLLLTCSMIIEIWGYNSIISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSLERAINMAILILLSIGSKLGGTLIVCRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFDSEAYNVLLVSIVLNTIISGVIVAFLVRGEEKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSRVSPSTTYLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNALDNFTAETKILVQQRRAVSPFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGIIVERGLARVPGFSQLVASEAIQNVATLFFGGPDDREAIAWSLRISGSPRVNLTIIRFLLSSSSQNEIIESGESEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAQTVESLKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDAKKALLHA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02253 782 Gene3D - 19 420 IPR038770 -
Gma12g02253 782 PANTHER CATION/H(+) ANTIPORTER 1 21 772 - -
Gma12g02253 782 PANTHER CATION/H + ANTIPORTER 21 772 - -
Gma12g02253 782 Pfam Sodium/hydrogen exchanger family 27 412 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02253 Gma-Chr12 43519921 43522736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02253 7 775 Antiporter Super Family AT1G16380 39.949 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02253 - - gmx:100804522 1489.17