Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02240 atgttctcagatttcagctacgatgtttttctaagttttagtggtggaaccagcaacccttttgttgatcctctctgtcgagctttgcgtgacaaaggaatcagcatcttcagatcagaagatggagaaactagacctgccattgaggaaattgaaaaatccaaaatggtaatcgttgtgttttgtcaaaactatgcattttccactgagtctcttgatgaacttgtcaagatccgagagtatgttgacaatagaagaaaacaggtttggacaattttttacatagtggaaccatcagatgtacggaaacaaagaaattcttacaaagatgccatgaatggtcatgaaatgacatatggaaaagactcggagaaggtaaaagcatggagggaagctttgactagagtatgcgacctAAGCGGAATACATTGCAAGGACCATATGTTTGAAGCTGAACTTCAGAAGATTGTTGAAGCTGCATCCTGTAAATTATTTCGTGTGCCTGGACAAATGAACCATGCAGTTGGACTTGATGATCACTTTGAACAGGTGAaagcattcatagatgttgagtccaatgataaggttggcgtattgggaatttatggaggtggtggaataggcaagaccacatttgccgtctatctatatgaaaagattagacattattattttgaagctgcaagttttctgattaaagtcagagaacaatcaaaggaaagcaagaatcacttggaagatctccaaaacagacttctatctcaactgggtgtagacacaggaaccatgatagggagtacgaataaaggagaacttgaaatcaaacacaggcttggccatagaagagttcttctagttttggatgatgttgattcaaaagaacaattggagttactggctggaaaacatgattggtttggttctggcagtaggatcattataacaacaagagatgaagcggtgctagattatggtgttaaagttaagaaatataaaatgacggagctaaatgatcgtcactctcttgaactcttctgtcagaatgcctttgataagcctgaacctgcaaaaaactttgaaagtatttctcatcgtgcaataggctatgcaaagggtgtccctttggctttacaagtaataggatccaatttgaaaggaagaagcatagaggaatgggaaatcgaattgggaaaatatcggaaggttccaaatgctaagattcaaggtgtactaaaactaagcttcgatagcctgcctgagacagagatgggaatattcttggacattgcttgttttttcaaaggggagaaatggaattatgttaaaaggatattgaaggcttctgatataagttttaaagtacttgctagcaaatgtctaataatggttgatagaaatgactgcttggagatgcatgatctaatacaggacatgggtagagagattgttaggaatcaatcgccatcaaaccctggtgaccgtagtagattatggtctcacgaagatgttcttgaagtactgaaAAAAGATTCAGGAAGTATAACAATTGAAGGAATTATGCTTCATCCTCCTAAGCTTgaagtagtagataaatggactgatactgcctttgagaagatgaagaatctcagaattcttattgttcggaataccaaatttttaacaggacctagttctctaccgaataaattacaacttcttgattggataggattcccatcagagtcttttccacctaaatttgatcccaagaatattgttgacttcaagttatctcatagttCTCTGGTATCCATAAAGCCACCTCAAAAGGTATTTCAGAATTTGACTTTTGTCAATCTCTCCCAGTGTCATTTCATAACTAAAATACCTGACATGTTTGAAGCTAAAAACTTGAGAGTACTGACAATTGACAAATGCCCCAAATTGGAAGGGTTTCATCCATCTGCTGGACATATGCCTAACCTTGTATATTTAAGTGCATCAGAGTGCACCATGCTCACGAGTTTTGTGCCAAAAATGAATCTGCCATATCTGGAAATGCTTTCATTTAACTTTTGCAGTAAACTTCAAGAATTCCCAGAAGTAGGGGGGAAGATGGATAAGCCATTAAAGATTCACATGATAAATACTGCTATTGAGAAGTTTCCAAAGTCCATTTGTAAAGTTACAGGGCTTGAGTATGTTGACATGACAACTTGCAGGGAACTCAAAGATTTATCAAGTTTTGTGTCATTGCCAAAACTTGTCACATTAAAGATGAATGGATGTTCGCAACTTGCAGAATCATTTAAAATGTTCAGAAAGAGCCATTCTGAAGCAAATAGCTGTCCAAGTTTAAAGGCATTATATTTAAGCAaggctaatctgtcacatgaggatctttccataattcttgaaatatttccaaaattggaatacttaaatgtgtcccacaatgaatttgaatcactcccagattgcatcaaaggatcattgcagttgaaaaaacttaatttaagtttttgcaggaatcttaaggaaattccagaacttccatcaagtATTCAAAGGGTAGATGCAAGATACTGTCAATCCTTAAGTACAAAGTCATCAAGCGTGCTGTTGTCTAAGATTTATAAAGAAAGGGAAAAAATACAAGTTGTGATGCCAGAAACTGAAATTCCAAAGGAGTTTGACAGTAAAGATGTCCTGCTTTTCTGGGCTCGCCGGAAGTTCCCTGTTGTTGCTTTTGTTTTTGTTTTCGAGGAAGTAAAAAAGAATGATGATATACAGATGGATACCTCAGAATTGTTTCCTGGAGTTGTATCAGCTGAGGAGTCCTACACTGTTGGCCTGAACTTGTTTATAGACGGCAAAGAAATATGTCGCAAAGATCATCATTATTGGAGTATTGGGGATCAACATTTGTTAGTATGTGATCTACAGGTTTTGTTTAAAAATGAAGAGTGGCAGGATCTTGGAGATGACTGGAAGGCCTTTCAGATTCAATGTGAATCAACGTTGACTCTGAGTCATCAGGAAGTTTATGTGGACAAGCAGAAAACAAACACTGATGATATTCAATATATCTCTCCCAATTTAACAGGTTTGGTTCCAAAAACAAGTCCACATAAGAAAACAAGACATGGACAAAATTGTGATGTAATAGAAAAATTTGGCCAGAACTTGTTAATACAAACTACCTCTGTTGCCAACGTGTTATTGAGCTGGTGGAGGAATGCCAAGGCTGATATTAGAGGGGAAGTTTCAGCCTCTACCTATGAGGCAAGTTCACTGCAAGAACATGAAGATGTTGTCTGGGATGTGGCACAGATTTTGGAGATGCTGCTGGAGAATTTGCCCCAGCATATTACTGATTCAGAAGTTCAAAGAACAGGCCTATTGGCGGTTGAATCATTGATTGCACGGGCACAACATAAGAAGGAATACGGTCATGAGAAGTTGCACATCAATCTAACCATGCCTATTGTTCTAGTGGAATGTAGATGTCACCCTCATAAAGAATTAGAAGGAGCTCAAAACCTTCGCTATTGGGGATCTGTGGAGCTAGAAGAAGGAGACCCACGTGTGTGGAAAATTTGGAAGAGCAATGAAGCCTTCAAGGAGAGGCTAAATTACACAGTTCTGTTGAAATGTGAGCATCACTCTAGAGAGGAAGCTTCAAAATCTGACCATGGGGAATCCTTGGAGGAAGAACACAAGGGTTCTGAATTACAAGCATTGATGAGGAGGATAGAAGAAGACACTATAAGGTTGAATAAGTCTTATGGAAAGTTGAAGGCATCTATTGTTCCAATGGATGTTCTAGTTTCTGACAAATATCTTCTGGAAACGGCAATCATTAGAGGACTAGAAAGATTGGGAAGGTTGGGGTCTAATTTCAACAAGACAGAATATGGAAAAttgagggtggagcatcatgctcatagcattactcatatggagcatgagttgaggatggagcaggatgctcagagctctactcagaatcaggagcggcatgagttgggggtggagcatgatgctcagagctctactcagGAAAAGAATAAGTTGGGTTGGATCAGATCATTACTAGGTGGATTTGGGAGGCAAAGCAGGTGA 4107 0.2087 MFSDFSYDVFLSFSGGTSNPFVDPLCRALRDKGISIFRSEDGETRPAIEEIEKSKMVIVVFCQNYAFSTESLDELVKIREYVDNRRKQVWTIFYIVEPSDVRKQRNSYKDAMNGHEMTYGKDSEKVKAWREALTRVCDLSGIHCKDHMFEAELQKIVEAASCKLFRVPGQMNHAVGLDDHFEQVKAFIDVESNDKVGVLGIYGGGGIGKTTFAVYLYEKIRHYYFEAASFLIKVREQSKESKNHLEDLQNRLLSQLGVDTGTMIGSTNKGELEIKHRLGHRRVLLVLDDVDSKEQLELLAGKHDWFGSGSRIIITTRDEAVLDYGVKVKKYKMTELNDRHSLELFCQNAFDKPEPAKNFESISHRAIGYAKGVPLALQVIGSNLKGRSIEEWEIELGKYRKVPNAKIQGVLKLSFDSLPETEMGIFLDIACFFKGEKWNYVKRILKASDISFKVLASKCLIMVDRNDCLEMHDLIQDMGREIVRNQSPSNPGDRSRLWSHEDVLEVLKKDSGSITIEGIMLHPPKLEVVDKWTDTAFEKMKNLRILIVRNTKFLTGPSSLPNKLQLLDWIGFPSESFPPKFDPKNIVDFKLSHSSLVSIKPPQKVFQNLTFVNLSQCHFITKIPDMFEAKNLRVLTIDKCPKLEGFHPSAGHMPNLVYLSASECTMLTSFVPKMNLPYLEMLSFNFCSKLQEFPEVGGKMDKPLKIHMINTAIEKFPKSICKVTGLEYVDMTTCRELKDLSSFVSLPKLVTLKMNGCSQLAESFKMFRKSHSEANSCPSLKALYLSKANLSHEDLSIILEIFPKLEYLNVSHNEFESLPDCIKGSLQLKKLNLSFCRNLKEIPELPSSIQRVDARYCQSLSTKSSSVLLSKIYKEREKIQVVMPETEIPKEFDSKDVLLFWARRKFPVVAFVFVFEEVKKNDDIQMDTSELFPGVVSAEESYTVGLNLFIDGKEICRKDHHYWSIGDQHLLVCDLQVLFKNEEWQDLGDDWKAFQIQCESTLTLSHQEVYVDKQKTNTDDIQYISPNLTGLVPKTSPHKKTRHGQNCDVIEKFGQNLLIQTTSVANVLLSWWRNAKADIRGEVSASTYEASSLQEHEDVVWDVAQILEMLLENLPQHITDSEVQRTGLLAVESLIARAQHKKEYGHEKLHINLTMPIVLVECRCHPHKELEGAQNLRYWGSVELEEGDPRVWKIWKSNEAFKERLNYTVLLKCEHHSREEASKSDHGESLEEEHKGSELQALMRRIEEDTIRLNKSYGKLKASIVPMDVLVSDKYLLETAIIRGLERLGRLGSNFNKTEYGKLRVEHHAHSITHMEHELRMEQDAQSSTQNQERHELGVEHDAQSSTQEKNKLGWIRSLLGGFGRQSR 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02240 1368 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1054 - -
Gma12g02240 1368 MobiDBLite consensus disorder prediction 1319 1350 - -
Gma12g02240 1368 Pfam TIR domain 7 144 IPR000157 GO:0007165
Gma12g02240 1368 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 141 IPR035897 -
Gma12g02240 1368 ProSiteProfiles TIR domain profile. 5 157 IPR000157 GO:0007165
Gma12g02240 1368 SUPERFAMILY L domain-like 486 866 - -
Gma12g02240 1368 Gene3D Ribonuclease Inhibitor 706 877 IPR032675 -
Gma12g02240 1368 Gene3D Ribonuclease Inhibitor 529 705 IPR032675 -
Gma12g02240 1368 MobiDBLite consensus disorder prediction 1218 1237 - -
Gma12g02240 1368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 429 IPR027417 -
Gma12g02240 1368 Coils Coil 231 251 - -
Gma12g02240 1368 Gene3D - 3 164 IPR035897 -
Gma12g02240 1368 Gene3D - 335 419 IPR042197 -
Gma12g02240 1368 Gene3D - 165 330 IPR027417 -
Gma12g02240 1368 Pfam NB-ARC domain 179 393 IPR002182 GO:0043531
Gma12g02240 1368 PRINTS Disease resistance protein signature 198 213 - -
Gma12g02240 1368 PRINTS Disease resistance protein signature 277 291 - -
Gma12g02240 1368 PRINTS Disease resistance protein signature 370 384 - -
Gma12g02240 1368 PRINTS Disease resistance protein signature 744 760 - -
Gma12g02240 1368 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1054 IPR044974 GO:0006952
Gma12g02240 1368 SMART till_3 6 139 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02240 Gma-Chr12 43415080 43420471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02240 7 760 WRKY Transcription Factor Family AT4G12020 29.215 5.44e-73 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02240 - - gmx:100801337 2699.08