Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02216 ATGAGCTCTCGCATATCGGCATTTGCTCAGCGCGAAAAACAGCAGCAGCAGCAGCAGCAGCTGCGCAGTCTCAGTTCGAGAGACCTCGGTGCCAACAGTCCTGCCTCACTTGTTGGCTCCCCTGCAAACCCTTGGTCAAAGTGGGGATCTCCTAATGGGAAAGCTGATTGGTCAGTAAATGGAGACACACTTGGTCGTCAGATGCGAAGATCATCCTCGTTTGAGCTCAAGAACAACGGGGAAGAGCCTGATCTCTCTTGGGTCCAATCTCTGGTGAAGGAATCCCCACCTGAGATGATCAAAGAGAAGTTTGCATCTCCTATGCCTACTGCATCTGCTGATGGACCAAATTCAAATTCCCAAATTGAATCCATTGACCATTCTGTTTTAGGAGCCTGGCTTGAGCAAATGCAGCTGGATCAGCTTAAGTTGTTTCTTTCTGAGGGAATAATTAGAGACTGGACTAGTGTCATGAAGGTGGTAGTTGGGTTTTTTATTGGGGAGATTACTCTGCGCCAACTGTAG 525 0.4838 MSSRISAFAQREKQQQQQQQLRSLSSRDLGANSPASLVGSPANPWSKWGSPNGKADWSVNGDTLGRQMRRSSSFELKNNGEEPDLSWVQSLVKESPPEMIKEKFASPMPTASADGPNSNSQIESIDHSVLGAWLEQMQLDQLKLFLSEGIIRDWTSVMKVVVGFFIGEITLRQL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02216 174 MobiDBLite consensus disorder prediction 1 62 - -
Gma12g02216 174 PANTHER ARM REPEAT CCCH-TYPE ZINC FINGER PROTEIN 1 144 - -
Gma12g02216 174 MobiDBLite consensus disorder prediction 1 47 - -
Gma12g02216 174 PANTHER UNKEMPT FAMILY MEMBER 1 144 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02216 Gma-Chr12 43166414 43167877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02216 5 141 C2H2 Transcription Factor Family AT5G12850 38.776 7.42e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02216 - - gmx:100784225 273.863