Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02202 ATGGGGAAGATAGAAAAAAACAAAAACACCTTATTGACATCACCTTTTCTATCATCCTTCAAGTCATCATCTTCTTCCTCTTCTTCTTTGATGATGGCTACCCTCCTGGTCATTCTCTTGGCCTTGTTTTCTCCTTCACTAGGCCTTCCCTTAGCATCTTTCCAACCAAAAGACAATTTCCTCATTGATTGTGGTGCTGAAAACACAGTGACTCTCCCTGATGGAAGACAATTCAAATCAGACCCTCAAGCCAGATCCTTCTTGCAAGCCAATGATGAGTACAAAGTCTCAGCAAATGATGTGAATTTCCCTTCACCTATATACTCAAATGCAAGGATCTTCATTCAGGAAGCTAAGTACTCCTTCCATTTGGTTCAACCGGGTTTCCATTGGATTCGGCTTTATTTCTACCCCATCAAGAACAACATCTTTGATCTCCAGAAGGCAAGTTTTTCTGTCTACACAGATACCTATGTGCTACTCCACAGCTTCAATGTCAACAATACTGACAAGCCAATCTTCAAGGAGTACCTCATCAATGCAACCGAGCCTCAATTCACCATGTCCTTCATTCCCCTTAAGAACTCAGCTGCATTCATCAATGCCATTGAGGTTGTCTCAGCTCCTGATAACCTGATCTTCGACACCGGGGCCGGCCTTTTCCCCGTTGGCGAGTTCAGTGGCCTCACAACTTACGGCTTCCAGCCTGTTTACAGGGTCAACAATGGAGGGCCTCTCATCACCTCATCAAATGACACCCTTGGAAGGACTTGGGAAACTGATGAGCCTTACCTCACAAACAAGAACTTGGCCAAGAGTGCTTCGGTGGCCACCTCCGCGGTTAAGTTCCCACAAGACAATCCTTCAATTTCTCCCATGATTGCACCACAAACTGTGTATGCCTCTGCCACTGAGATGGGTGATGCTGGTGTGAATCAGCCAAATTTCAATGTGTCATGGAAATTTGATGTGGACACCTCTTTTAGCTACCTTGTTAGGCTTCACTTCTGTGACATTGTTAGCAAAGGGCTCAATGAACTCTACTTTAATGTTTATGTTAATGGGAAAGTGGCAATCAATAACTTGGATTTATCAGCCATCACTGGTGCCTTGTCAACCCCATATTACAAAGACATTGTGGTGAATGCAACATTGATGTCTGAGGGGCTAACAGTTCAGGTTGGTCCAGCAAATGCTGATGGTGGAAATGCCAATGCCATTGTGAATGGCATAGAGGTCTTGAAGATGAGCAGCTCTGTGAACAGTTTGGATGGAGAATTTGGTGTTGATGGAAGAAGTGTTAATGGTTCTAACCGCGGCACGGTGGCAGCCGTTGGATTTGCCATGATGTTTGGAGCCTTTGTGGGTCTTGGTGCTATGGTGATCAAGTGGCACAAGAGGCCTCAGGACTGGCAAAAGAGGAACAGCTTCTCCTCATGGTTGCTTCCTCTGCACGCTGGTGACACAAGCTTCATGAGCAAGAACTCAATGGGAAAGAGCAACTTCTTCTCCTCGTCGATGGGATTAGGCCGGTACTTCTCCTTCGCGGAACTTCAGGAAGCAACCAAGAACTTTGACTCCAAGAACATCATTGGTGTTGGTGGATTTGGCAATGTGTATTTGGGTGTGATTGATGAGGGGACTCAAGTGGCAGTCAAGAGAGGAAACCCTCAATCAGAACAAGGCATCACAGAGTTCCAAACTGAAATCCAAATGCTGTCTAAGCTCAGGCACAGGCACTTGGTGTCCTTGATTGGATACTGTGATGAGAATGATGAGATGATCCTGGTTTATGAGTACATGCCTAATGGCCACTTCAGAGACCATCTTTATGGAAAGAACTTACCTGCTCTCTCATGGAAGCAAAGACTAGATATCTGTATTGGATCAGCTCGCGGTCTTCACTACCTTCACACCGGCACAGCTCAAGGCATCATTCACCGCGATGTCAAGACCACCAACATCTTGCTTGATGAGAATTTCACAGCCAAGGTTTCTGATTTTGGTCTTTCAAAGGATGCACCAATGGGGCAGGGTCATGTTAGCACTGCTGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAACTGACTGAAAAGTCTGATGTGTACTCATTTGGGGTGGTTCTGCTTGAGGCACTCTGTGCAAGACCAGCCATCAACCCTCAGTTGCCCCGCGAACAAGTAAACTTGGCTGATTGGGCGATGCAATGGAAGAGGAAGGGCCTTCTTGACAAGATCATTGACCCTCTCCTAGTTGGTTGCATCAATCCTGAATCCATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCAGATCATGGTGTGGATAGGCCTTCAATGGGAGATGTTTTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGGAAAGGCTGAGGATGAGACTAAGTCATCATCAGCAGTCCCTACTGCAGCTGTTCCTACTTCACCTGCCCCACCAACACCTCCCATTTCTTCTGATGACCGCCCGGCTGCGCCTGCTCGTCCGGAAGTGAATAATAATACTTCATCGGATGTGCATTCTATTGATGACCATTCTGGAACTGCAATGTTTGCTCAGTTTAGCAATCTCAATGGCAGGTGA 2637 0.4638 MGKIEKNKNTLLTSPFLSSFKSSSSSSSSLMMATLLVILLALFSPSLGLPLASFQPKDNFLIDCGAENTVTLPDGRQFKSDPQARSFLQANDEYKVSANDVNFPSPIYSNARIFIQEAKYSFHLVQPGFHWIRLYFYPIKNNIFDLQKASFSVYTDTYVLLHSFNVNNTDKPIFKEYLINATEPQFTMSFIPLKNSAAFINAIEVVSAPDNLIFDTGAGLFPVGEFSGLTTYGFQPVYRVNNGGPLITSSNDTLGRTWETDEPYLTNKNLAKSASVATSAVKFPQDNPSISPMIAPQTVYASATEMGDAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNGKVAINNLDLSAITGALSTPYYKDIVVNATLMSEGLTVQVGPANADGGNANAIVNGIEVLKMSSSVNSLDGEFGVDGRSVNGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSKNSMGKSNFFSSSMGLGRYFSFAELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGKNLPALSWKQRLDICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGCINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDETKSSSAVPTAAVPTSPAPPTPPISSDDRPAAPARPEVNNNTSSDVHSIDDHSGTAMFAQFSNLNGR 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02202 878 CDD STKc_IRAK 531 795 - -
Gma12g02202 878 MobiDBLite consensus disorder prediction 847 865 - -
Gma12g02202 878 MobiDBLite consensus disorder prediction 824 840 - -
Gma12g02202 878 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Gma12g02202 878 PANTHER BNAC03G60370D PROTEIN 44 856 - -
Gma12g02202 878 PANTHER OS07G0166700 PROTEIN 44 856 IPR045272 GO:0004714|GO:0006468
Gma12g02202 878 Gene3D - 235 418 - -
Gma12g02202 878 Gene3D - 59 209 - -
Gma12g02202 878 SMART serkin_6 525 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02202 878 Gene3D Transferase(Phosphotransferase) domain 1 601 821 - -
Gma12g02202 878 Pfam Protein tyrosine and serine/threonine kinase 528 723 IPR001245 GO:0004672|GO:0006468
Gma12g02202 878 Pfam Malectin-like domain 62 415 IPR024788 -
Gma12g02202 878 MobiDBLite consensus disorder prediction 807 865 - -
Gma12g02202 878 SUPERFAMILY Protein kinase-like (PK-like) 508 792 IPR011009 -
Gma12g02202 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Gma12g02202 878 Gene3D Phosphorylase Kinase; domain 1 487 600 - -
Gma12g02202 878 ProSiteProfiles Protein kinase domain profile. 525 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02202 Gma-Chr12 43024997 43027633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02202 54 878 Receptor kinase-like Gene Family AT4G39110 68.187 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma12g02202 Malectin_like 3.7e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02202 - - gmx:100790759 1686