Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02176 ATGAAGAAGGTCACTTCCTCTCAATTTCTCCTCCTTCAACTCCTTGCCTTATGGTTCACATCACTTGCTTTTGGAGCCAATACCACTCAGCCAGAAGAAGTGCAAGCTCTGAAAGATatgggcaagatccttggtaagaaggaatgggacactgatatagacccatgttcaagccaacatccctggttcacacctaaggtggacaccgtagagaacaatgtcacttgcaattgctctatccccggtgacaacttctgccatgttgtttcaatATTGCTGAAATCACAAAATCTTCCAGGCAAGCTCCCACCCGAACTGATAAGGTTGCCTTACCTCGAAGAAATCGACCTCACTCGCAACTACCTTAACGGTACAATACCTACCGAATGGGGCTCCTCCAATCTTCGCAAAATTTCTCTTCTTGGAAATCGCTTAACTGGTCCAATCCCAAAAGAGATAGGAAACATCACCACGCTCGAAAGTTTGGTCTTGGAATTCAATCAATTTTCTGAAAATCTACCTCCAGAACTTGGGAACCTTTCTAGCATTCAAAGATTGCATCTTACGTCTAACAACTTTACCGGAGAGTTGCCTGAAACTTTGGCGAAACTTACAACATTGACAGAACTCCGGCTTAGTGACAATAATTTCTCTGGAAAGATACCCGATTTTATTCACAGATGGACAAATCTTGTTTTACTATCAATTCAAGGGAGTGGTTTAAGTGGGCCTATTCCTTCTGGAATTTCATTTCTGCAAAACTTAACAGACTTGAGAATCAGTGACTTGAATGGATCTGATTCTACTTTTCCACCGATTAATAATATGACAAAATTGCAAACGCTAGACCTAAGCTTTAACAAATTAAGCGGACAGATTCTGGAAACCTATAAAAATCTTTCAAGCCTGACCTACATATATTTTACTGAAAACTTGTTTACTGGACCTGTACCGAACTGGATAGAAGATGCTGGTAAATACATTGATCTTTCATATAACAACTTCAGCAATGAAACCCTCCCGCAACAAACATGCCCACAGGCTCAACACACCGGAACAGAAGTGAACTTGTTTGCAAGCTTTCCAATGAGCCAAAATGGACCTCTTCCCTGTCGTCCGATGGCAAACAAATATGCATGTTCTAGAATCTTAAACTCTCTCCATATAAACTGTGGTGGTGCAAGAGAGACAAGCAGTGAAGGTATAATATATGATGGCGATTCAGATTCATTAGGACCATCAACATCTAAAGAGGTGGGAGAAAACTGGGCAATTAGCAACACTGGTCACTTCTTGAATAGCAATGCCTCAGAAACCTATATCCAACAAAATacaactaggctttctatgcccgataatgccttgtataagaccgcgcgtgtgtcccccatttctctcacttactatggattttgtctggaaaatggagactacactgtcacgctccattttgcagagatagctttcactgatgatgatacatataagagcctagggaggcgtatatttgatatttacattcagAGAAAACTGGTATGGAAGGATTTCAATATTGCATATGAAGCAGGAGGAGTTGGAAAGGAAATTAAAATACCATTTCCTGCTTATGTGAATAATAACTCTTTAGAGATTCGCTTTTATTGGGCTGGGAAAGGGACAGATGGTATCCCATATAAATCAATATATGGTCCTCTTATATCAGCTATATCTGTCACTCGTGACTCTACAGGTGGCAGCATGTCTGCAGGGGTTGTAGTTGGAATAGTAGTTGCTGCAATTGTTCTTGTCATCCTAATTGTACTTTGCTGGAGAATTTATATTAGGAAAAGAaattcattagcaaaagAGTTAAAGGAtttaaatctgcaaacgagtttatttactatgcaccaaatcaaagttgcaactaacaactttgatatttccaacaagattggagaaggaggctttggtcctgtttataagggcattttatcaaatggcacgataatagctgtcaagatgctttcatctaggtcaaagcaaggaaatcgtgagtttataaatgagataggcttgatttcagccttgcagcacccttgtcttgttaaactttatggttgttgcgttgaaggagatcaattgttgttagtatacgaatatatggaaaacaatagccttgcacaagctttatttgGTAGTGGAGAATCTCGATTAAaattggattggccaacaagacacaagatctgccttggtattgctagaggtttggctttcttacatgaagaatcaagattaaaaattgttcacagggacattaaggccactaatgtgttactagacaaagacttaaatccaaaaatatctgattttggtctagccaagctcgatgaggaggacaatactcatataagcacaagaatagctgggacTTAtggatatatggctccagaatatgcaatgcatggttatttgacagacaaagcagatgtgtatagttttggagtggttgccttggaaattgtatctggaaagagcaataccatccaccgacccaagcaagaagcattgcatcttctagattggGCACATTTATTGAAAGAGAAAGGTAACCTAATGGAGCTAGTTGATAGAAGGTTAGGTTCAAATTTCAATGAAAATGAGGTAATGATGATGATCAAAGTGGCTCTCCTatgcaccaatgccacttcaaaccttaggcccaccatgtcatcggtgcttagtatactagaaggaagaactatgattccagaatttattTCAGATCCATCTGAGATAATGGATGAAATGAAGTTAGAGGCAATGCGACAATATTACTTTCAAATAGAAGAAAATGAGAGAAACGAGACACAAACAGAAAGTCATAGTTTATCAATTGATGGGTCATGGATGGCTTCATCTTCATCAGCTGCAGATCTATATCCTGTCCACGTTGATTCTTCCTATTGGGAGAAAAGAAATTAG 2964 0.2416 MKKVTSSQFLLLQLLALWFTSLAFGANTTQPEEVQALKDMGKILGKKEWDTDIDPCSSQHPWFTPKVDTVENNVTCNCSIPGDNFCHVVSILLKSQNLPGKLPPELIRLPYLEEIDLTRNYLNGTIPTEWGSSNLRKISLLGNRLTGPIPKEIGNITTLESLVLEFNQFSENLPPELGNLSSIQRLHLTSNNFTGELPETLAKLTTLTELRLSDNNFSGKIPDFIHRWTNLVLLSIQGSGLSGPIPSGISFLQNLTDLRISDLNGSDSTFPPINNMTKLQTLDLSFNKLSGQILETYKNLSSLTYIYFTENLFTGPVPNWIEDAGKYIDLSYNNFSNETLPQQTCPQAQHTGTEVNLFASFPMSQNGPLPCRPMANKYACSRILNSLHINCGGARETSSEGIIYDGDSDSLGPSTSKEVGENWAISNTGHFLNSNASETYIQQNTTRLSMPDNALYKTARVSPISLTYYGFCLENGDYTVTLHFAEIAFTDDDTYKSLGRRIFDIYIQRKLVWKDFNIAYEAGGVGKEIKIPFPAYVNNNSLEIRFYWAGKGTDGIPYKSIYGPLISAISVTRDSTGGSMSAGVVVGIVVAAIVLVILIVLCWRIYIRKRNSLAKELKDLNLQTSLFTMHQIKVATNNFDISNKIGEGGFGPVYKGILSNGTIIAVKMLSSRSKQGNREFINEIGLISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLAQALFGSGESRLKLDWPTRHKICLGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGKSNTIHRPKQEALHLLDWAHLLKEKGNLMELVDRRLGSNFNENEVMMMIKVALLCTNATSNLRPTMSSVLSILEGRTMIPEFISDPSEIMDEMKLEAMRQYYFQIEENERNETQTESHSLSIDGSWMASSSSAADLYPVHVDSSYWEKRN 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02176 987 Gene3D Ribonuclease Inhibitor 34 200 IPR032675 -
Gma12g02176 987 Pfam Malectin domain 386 569 IPR021720 -
Gma12g02176 987 CDD STKc_IRAK 645 912 - -
Gma12g02176 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Gma12g02176 987 Gene3D Transferase(Phosphotransferase) domain 1 715 920 - -
Gma12g02176 987 Gene3D Phosphorylase Kinase; domain 1 603 714 - -
Gma12g02176 987 SMART serkin_6 639 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02176 987 SUPERFAMILY Protein kinase-like (PK-like) 622 929 IPR011009 -
Gma12g02176 987 Gene3D - 385 576 - -
Gma12g02176 987 SUPERFAMILY L domain-like 60 330 - -
Gma12g02176 987 ProSiteProfiles Protein kinase domain profile. 639 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02176 987 Gene3D Ribonuclease Inhibitor 203 370 IPR032675 -
Gma12g02176 987 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 80 952 - -
Gma12g02176 987 PANTHER PUTATIVE-RELATED 80 952 - -
Gma12g02176 987 Pfam Protein tyrosine and serine/threonine kinase 641 908 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02176 Gma-Chr12 42757850 42770618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02176 24 942 Receptor kinase-like Gene Family AT1G53420 53.542 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g02176 PK_Tyr_Ser-Thr 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02176 - - gmx:100785451 1921.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02176 12 42757850 42770618 Gma12g02176 12 42757850 42770618 ECH