Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02172 ATGACGTCGGGGACGAGGCTACCCACGTGGAAGGAGAGAGAGAACAACAAGAAGAGAGAGAGGAGAAGAAGAGCCATAGCGGCGAAGATCTTCGCGGGTCTGAGGATGTATGGGAACTTCAAACTCCCAAAACACTGCGACAACAATGAAGTCCTCAAAGCTCTCTGCAACAAAGCTGGTTGGACCGTTGAACCCGATGGAACCACTTACCGCAAGGGATGCAAGCCTTCAGAGGGCATGGAGATAGTTGGTGGATCATCAGCAGCAGcaagcccttgctcatcttaccatccaagtccatgtgcttcctacaatccaagccctggctcatcATCCCCTTACTACACCCAAATTCCCAATCCTGATGGCAACTCCCTCATTCCATGGCTCAAGAACCTCTCCACTGCTTCATCTTCAGCATCCTCTCCCAAGCTTCCCCACCTCTACCTCCACAGTGGCTCCATCAGTGCTCCTGTGACGCCTCCTCTGAGCTCTCCAACCGCCAGAACGCCACGAATCAATGCTGAGTGGGACGAGCAGTCTGCGCGGCCGGGGCCCGGATGGACCAGACAGCAGCACTACTCATTCCTGCCATCTTCTAGTCCTCCCAGCCCCGGCCGCCAGGTTGTTGACCCTGAATGGTTTGCTGGGATCAAGCTTCCTCATGTTAGTCCAACCTCACCAACATTCAGCTTGGTCTCCTCAAACCCTTTTGCCTTCAAGGAACATGCTTTGCCCTCCAGCGGTTCGCCAATGTGGACTCCGGCTCAGAGTGGAACATGCTCTCCTGCTGTTCCACCGGGTTCTTATCAGAATGCTGACATTCCTATGTCTGATGCCGTTTCGGATGAATTTGCATTTGGAAGCAACGTGTTGGGGCTTGTCAAGCCTTGGGAAGGAGAAAGGATCCATGAGGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGATGA 969 0.4943 MTSGTRLPTWKERENNKKRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNKAGWTVEPDGTTYRKGCKPSEGMEIVGGSSAAASPCSSYHPSPCASYNPSPGSSSPYYTQIPNPDGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWDEQSARPGPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVSPTSPTFSLVSSNPFAFKEHALPSSGSPMWTPAQSGTCSPAVPPGSYQNADIPMSDAVSDEFAFGSNVLGLVKPWEGERIHEEFGSDDLELTLGNSKTR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02172 322 MobiDBLite consensus disorder prediction 185 206 - -
Gma12g02172 322 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 322 - -
Gma12g02172 322 MobiDBLite consensus disorder prediction 178 207 - -
Gma12g02172 322 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 134 IPR008540 -
Gma12g02172 322 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 322 IPR033264 GO:0003700|GO:0006351|GO:0009742
Gma12g02172 322 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02172 Gma-Chr12 42625478 42628814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02172 1 322 BZR Transcription Factor Family AT1G78700 67.751 3.70e-130 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gma12g02172 BES1_N 1.3e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02172 - - gmx:100814517 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02172 12 42625478 42628814 Gma12g02172 12 42625478 42628814 ECH