Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02152 ATGGCTACCTTCTCCAAGGAACGCGAGAACTTTGTCTATGTTGCCAAGTTAGCTGAACAAGCTGAACGCTATGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAATTGAGTGTGGAAGAGAGGAACCTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGCATGTTAAGCGTATCAGGGATTACAGGAACAAGGTGGAGTTGGAGCTGTCCAACATTTGCAGTGACATTATGATAGTTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACGGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAGGCTGGTAATGAAAAGAAAGAGGTGGCAGATCAGTCACTTAAAGCATATGAGACAGCTTCTACCACTGCTGAGAGTGAACTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGACCTGGATACCCTGAATGAGGATTCTTACAAGGACAGTACCTTGATTATGCAGCTGTTGAGGGATAACCTTACTTTATGGACTTCTGATATCCCCGAAGAGGGTGAGGACCAAAAAATGGAAAGCACAACCAGGGGAGAAGATGAGTTAGGCCGCTAG 783 0.4419 MATFSKERENFVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELHVKRIRDYRNKVELELSNICSDIMIVLDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYETASTTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSDLDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEEGEDQKMESTTRGEDELGR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02152 260 MobiDBLite consensus disorder prediction 239 260 - -
Gma12g02152 260 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Gma12g02152 260 Gene3D - 2 251 IPR036815 -
Gma12g02152 260 PANTHER 14-3-3 PROTEIN 3 260 IPR000308 -
Gma12g02152 260 MobiDBLite consensus disorder prediction 240 260 - -
Gma12g02152 260 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Gma12g02152 260 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Gma12g02152 260 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Gma12g02152 260 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Gma12g02152 260 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Gma12g02152 260 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Gma12g02152 260 SMART 1433_4 8 249 IPR023410 -
Gma12g02152 260 PIRSF 14-3-3 2 249 IPR000308 -
Gma12g02152 260 PANTHER GENERAL REGULATORY FACTOR 2 3 260 - -
Gma12g02152 260 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Gma12g02152 260 Coils Coil 14 34 - -
Gma12g02152 260 Pfam 14-3-3 protein 15 236 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02152 Gma-Chr12 42390591 42394339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02152 5 245 14-3-3 family AT2G42590 80.083 2.21e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02152 K06630 - gmx:547574 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02152 12 42390591 42394339 Gma13g02399 13 38745352 38749244 ECH
Gma12g02152 12 42390591 42394339 Gma12g02152 12 42390591 42394339 ECH