Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02143 ATGTGTTGTCTTCCAATGTACCACGTCTCTTATCATTACCACCCACGACTCTCAATCCTCTCCAAGCAAAATCCTTGTGTGTGTCTCCCTTTTCTTCTCTCATCCTGGTATGTGTCCCTTCCCATTTCCATTCTTTATCACCAAATAGAAATGGGTGCAAAGAAATGGTTTAAGATAATAGTCAAATTGAAGAAATCGAAGAAAGATAAATCCAAAGAAGAAAAGGAACAGACCACTGATGAAAATTCAAATGAATACTCCAACGGGAAGCAGAGTACTCGTGAAGAGTCAAGTAGCAATGCCAATGAAGGTTTAATGATGGACCGGACTGTTCCTTCAAGGTTGATGGATGACATTGCAGCTACTCGGATTCAAAATGCATTTCGTTCATTTATGGCAAGAAGAACATTACACCATCTAAGGGGAGCAGAGAAATTCGAAGCTTTAATTCAAGATCACCTGGCCAGAGAGCAAACAGCAACTGCACTAAGCTATATACATTCATGGAGCAGAACACAAGAGCAAATTAGAGCTCGAAGAATCTGTATGATAACAGAAGCCAGGATTAAGCAGAAGAAATTGGAAACCCAGTTAAAAATTGAGGCCAAGATTCAGGAGCTCGAGGTAGTGGAATGGTGCAATGGTTCTGAAACCATGGAAGAAATCATTTCCAGGTTACATCAGCGAGAGGAAGCAGCAATTAAGCGAGAGCGAGCCATGGCATATGCCTTCTCCCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCTTATAGCCTTGGTAAGGAAAGTTGGGGTTGGAGCTGGACCGAGCGTTGGGTTGCGGCACGTCCTTGGGAAGTTCGGGTTCGAGGTCAGACCACCAAAACAACAAAACTCAACGGCCATGGGCAGGTGCAAAAAACCAAATTAGACAAGATGAACCAAAATGAAAGCAAAGTAGCCTTGGCTAAACCTACACTATCAAACGGGAAGGAAAGGAAAACGGTACTTCAGGGCTGTCAAAGAACAATGTATCCAAATAGCCCATTCTAA 1044 0.431 MCCLPMYHVSYHYHPRLSILSKQNPCVCLPFLLSSWYVSLPISILYHQIEMGAKKWFKIIVKLKKSKKDKSKEEKEQTTDENSNEYSNGKQSTREESSSNANEGLMMDRTVPSRLMDDIAATRIQNAFRSFMARRTLHHLRGAEKFEALIQDHLAREQTATALSYIHSWSRTQEQIRARRICMITEARIKQKKLETQLKIEAKIQELEVVEWCNGSETMEEIISRLHQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVRVRGQTTKTTKLNGHGQVQKTKLDKMNQNESKVALAKPTLSNGKERKTVLQGCQRTMYPNSPF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02143 347 Coils Coil 61 81 - -
Gma12g02143 347 PANTHER IQ-DOMAIN 10 51 335 - -
Gma12g02143 347 PANTHER IQ-DOMAIN 5-RELATED 51 335 - -
Gma12g02143 347 ProSiteProfiles IQ motif profile. 120 145 IPR000048 GO:0005515
Gma12g02143 347 MobiDBLite consensus disorder prediction 68 104 - -
Gma12g02143 347 MobiDBLite consensus disorder prediction 82 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02143 Gma-Chr12 42279163 42282752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02143 51 295 IQD Protein Family AT3G15050 50.612 2.50e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02143 - - gsj:114375165 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02143 12 42279163 42282752 Gma13g02410 13 38860836 38865080 ECH
Gma12g02143 12 42279163 42282752 Gma12g02143 12 42279163 42282752 ECH