Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02138 ATGGCTATGGTGGTTTGGTTGTTTGTGGCACTTATCATAACACAGTCTTACACAGCTAACCTTGCCAGCATGCTAACTGCTGAACGGCTTGAACCTACCATAGATGATATCGATCAGCTACGGAATAGCAACATCAAGGTTGGATATGGTAAAGGATCCTTTTTGAAAAATTTTGTGCAGGAAGTGTTACAGTTCCATCCTTCAAACATGAGGCACTTTGGAGCACTTGAAGAGTATGCTGAAGCTCTCAGAAGGAAAGAAATAGGAGTTGCATTTCTTGAAGTGATGTTGCAGAAAATCCTATGA 306 0.4118 MAMVVWLFVALIITQSYTANLASMLTAERLEPTIDDIDQLRNSNIKVGYGKGSFLKNFVQEVLQFHPSNMRHFGALEEYAEALRRKEIGVAFLEVMLQKIL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02138 101 PANTHER GLUTAMATE RECEPTOR 1 100 - -
Gma12g02138 101 Gene3D - 1 72 - -
Gma12g02138 101 SUPERFAMILY Periplasmic binding protein-like II 14 95 - -
Gma12g02138 101 Pfam Ligand-gated ion channel 1 44 IPR001320 GO:0015276|GO:0016020
Gma12g02138 101 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02138 Gma-Chr12 42234558 42234863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02138 3 101 Ion Channels AT5G11210 40.777 2.62e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02138 - - gmx:100799573 179.874