Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02137 ATGGCACAGTTACCTCCTAAAATACCAACCACACCCCAAAATTGGCCATCTTTTCCTCATCAAAGGGTACCCTCAATGGCCAACTTCAACCCCACAACCTCAACCACCACCATCGTCACCACTACAACTCCCCCACCGCCTTCATGGGTCGACGAGTTTCTAGACTTCTCGTCGGCCCGGCGGGGTGCCCATCGGCGATCTGCCAGCGACTCCATTACGTTCCTCGAGACACCGTTTCTCGAGGAATGCCGAACCGGTTTCGACCGGCTCGACGAGGACCAGCTCATTTCGATGTTCTCCGATGACATTGCTGTGGCGGCGCTGCCTCCGCCGCCGCTGTCGTCGGTGTCCAACCCCTCCTCGCCGACCTCCGACCAAAACAGCAGCGAGGAGAAGCCGATAGCAATGGCGCTGGACGTGAAGCCGAAGACGGAAAATGTTGAAGAGGAAAGCTCGAGCAAGGATGAGGAGGCGGCGGCGCCATCCTCCGTCACCGCCACCTGCACTGAAATCGTTGTTGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCTCAGAGGTCAAGGGTAAGAAAGCTACAATACATTTCTGAACTCGAAAGGAGCGTAACAACTTTGCAGACGGAGGTATCAGCATTGTCACCGCGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGCATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCACCAAGAAGCATTAAAGAAGGAAATAGAGAGACTAAGGCAAATCTATCATCAACAGAACCTACAAAAGATGAACAACAACAACAACAATCTTCAACAAACTCCACCAACATCACAGCCACAACAACAACCAATGCAACTTCATCATCATCGACAGCAGCAGATAACAGTGTCTCAAACATTGGGATGCAAGGACAACAAGGAGCAGCTCCTCAGTTGA 978 0.5102 MAQLPPKIPTTPQNWPSFPHQRVPSMANFNPTTSTTTIVTTTTPPPPSWVDEFLDFSSARRGAHRRSASDSITFLETPFLEECRTGFDRLDEDQLISMFSDDIAVAALPPPPLSSVSNPSSPTSDQNSSEEKPIAMALDVKPKTENVEEESSSKDEEAAAPSSVTATCTEIVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMNNNNNNLQQTPPTSQPQQQPMQLHHHRQQQITVSQTLGCKDNKEQLLS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02137 325 MobiDBLite consensus disorder prediction 110 164 - -
Gma12g02137 325 MobiDBLite consensus disorder prediction 14 46 - -
Gma12g02137 325 SMART brlzneu 172 236 IPR004827 GO:0003700|GO:0006355
Gma12g02137 325 SUPERFAMILY Leucine zipper domain 176 230 IPR046347 GO:0003700|GO:0006355
Gma12g02137 325 Coils Coil 255 275 - -
Gma12g02137 325 PANTHER BASIC LEUCINE ZIPPER 2 1 299 - -
Gma12g02137 325 PANTHER BASIC LEUCINE ZIPPER 34 1 299 - -
Gma12g02137 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Gma12g02137 325 MobiDBLite consensus disorder prediction 278 313 - -
Gma12g02137 325 Pfam bZIP transcription factor 176 221 IPR004827 GO:0003700|GO:0006355
Gma12g02137 325 MobiDBLite consensus disorder prediction 1 46 - -
Gma12g02137 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 226 IPR004827 GO:0003700|GO:0006355
Gma12g02137 325 CDD bZIP_plant_RF2 177 227 IPR044759 GO:0003700|GO:0006355
Gma12g02137 325 MobiDBLite consensus disorder prediction 136 156 - -
Gma12g02137 325 Gene3D - 175 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02137 Gma-Chr12 42226838 42229760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02137 1 254 bZIP Transcription Factor Family AT3G58120 51.399 7.63e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g02137 bZIP_1 1.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02137 - - gmx:100820197 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02137 12 42226838 42229760 Gma12g02137 12 42226838 42229760 ECH