Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02135 ATGAAGAAACCGAAGCAAACTCTGTTGAGCCCCAATTGGGTTCAACTTCAACAAAAGCTGAAGCTGAATGGCTCCAAGGCTTCAAGGACCTTCAAAACTTCAGATGAAGACACCCCAGAATCAATATTGGGGAAACGTAAAGAGAGACCAGATGATGAATCCAATGATTGTCAGATTAATCCTCTTGTTCCTGTAAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGCGTAGGTCAAGGAAACAAAAGTGCCCTTGGAAGAGTAACACTGGTCAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTCCGGCCAATTGAGCGAGTTGTTGACTTCCGCACTAAAATTAGTGGCATAAGACCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGGCTGCTCAGAAGAAAGTGGCAGAGTTGATCAATGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGATCTTAAGGCATTATTATTAAGTCATCCCAGAAAAGATATACGGGATACTTCTGAGTACCAACCATTTCTAAACAGGTCAAGTAGCAGAAGAGCACTGCGGCATCTTGCTGCCAAACATCTTGGTGTTAACATCCAAACAGGAGAGCACTGTCCAATAGAAGATGCTCGTGCTGCCATGCTGCTTTACCAAAGAAATAAAAAAGAATGGGAGAAGAGCATAAAAGATCAATTTCGGTTGAAACAGAAGCAAAGGAAATCAAAGCAAAAAAAGAAGCTGAAGAATGAACACACTTCAAATGGCAACCATGTTGAAATTTGA 801 0.4145 MKKPKQTLLSPNWVQLQQKLKLNGSKASRTFKTSDEDTPESILGKRKERPDDESNDCQINPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHPRKDIRDTSEYQPFLNRSSSRRALRHLAAKHLGVNIQTGEHCPIEDARAAMLLYQRNKKEWEKSIKDQFRLKQKQRKSKQKKKLKNEHTSNGNHVEI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02135 266 CDD REX4_like 75 224 IPR037431 GO:0006364|GO:0008408
Gma12g02135 266 Pfam Exonuclease 75 223 IPR013520 -
Gma12g02135 266 SUPERFAMILY Ribonuclease H-like 74 231 IPR012337 -
Gma12g02135 266 SMART exoiiiendus 73 232 IPR013520 -
Gma12g02135 266 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 53 253 IPR034920 -
Gma12g02135 266 MobiDBLite consensus disorder prediction 239 266 - -
Gma12g02135 266 Gene3D - 70 251 IPR036397 GO:0003676
Gma12g02135 266 Coils Coil 213 233 - -
Gma12g02135 266 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 53 253 - -
Gma12g02135 266 MobiDBLite consensus disorder prediction 24 60 - -
Gma12g02135 266 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02135 Gma-Chr12 42204116 42207883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02135 74 229 C2H2 Transcription Factor Family AT5G40310 37.427 3.42e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02135 K18327 - gmx:100819122 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02135 12 42204116 42207883 Gma12g02135 12 42204116 42207883 ECH