Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02128 ATGGCCCCAAGAGACAGCCGAGCCACCGCGTTCGCCGGACCAGGCCCAGGCCCATCACCGGCCCACAAAGAGATCCGCTACCGAGGCGTCCGGAAACGCCCCTGGGGCCGCTACGCCGCCGAGATCCGCGACCCCGGCAAGAAAACGCGCGTCTGGCTCGGCACCTTCGACACAGCCGAGGAAGCCGCTCGAGCGTACGACACCGCAGCGCGTGAGTTTCGCGGTGCCAAGGCCAAGACCAATTTTCCGACACCCTCGGAACTCATCCTTAACAACAACATTCGCAGTCCCAGCCAGAGCAGCACCCTCGACTCTTCCTCTCCCCCGTCACCGCCACCGCCGCTTGACCTTACCCTAACCCCTCTCTCCGTGGCCGTCACCGTCTTCCCGGTGGCTCGTCCGGTTCTATTCTTTGACGCGTTCGCGCGTGCGGACGCCATGATCGCCGTCTCCCGCCGCGAGATGTGTGGCTTTGAACGCCCCGCCGCTGATTTCCGCCGTAACGACTCCGATTCCGATTACAACCGCCGCGTGCTCCTTGATCTTGACCTGAACGTGCCTCCTCTCCCGGAGGTTGCCTGA 582 0.6443 MAPRDSRATAFAGPGPGPSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGAKAKTNFPTPSELILNNNIRSPSQSSTLDSSSPPSPPPPLDLTLTPLSVAVTVFPVARPVLFFDAFARADAMIAVSRREMCGFERPAADFRRNDSDSDYNRRVLLDLDLNVPPLPEVA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02128 193 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Gma12g02128 193 PANTHER ERF FAMILY PROTEIN 130 175 - -
Gma12g02128 193 PANTHER ERF FAMILY PROTEIN 1 120 - -
Gma12g02128 193 MobiDBLite consensus disorder prediction 84 105 - -
Gma12g02128 193 CDD AP2 26 83 IPR001471 GO:0003700|GO:0006355
Gma12g02128 193 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Gma12g02128 193 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Gma12g02128 193 MobiDBLite consensus disorder prediction 82 115 - -
Gma12g02128 193 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Gma12g02128 193 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Gma12g02128 193 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 120 - -
Gma12g02128 193 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 130 175 - -
Gma12g02128 193 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Gma12g02128 193 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Gma12g02128 193 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02128 Gma-Chr12 42121604 42122685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02128 23 139 AP2-EREBP Transcription Factor Family AT3G15210 65.909 1.71e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma12g02128 AP2 6.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02128 K09286 - gmx:100500601 318.931