Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02125 ATGGCCGATGTGGCAGGTCTAGTTGAGGCATCGGGATCCAGATTCAGCTCATTGGAGCTTATTGGGCAGGGATCATTCGGAGACGTCTATAAAGCATTTGACAGGGAGCTCAACAAACTAGTCGCCATCAAAGTAATTGACTTGGAAGAATCagaggatgaaattgatgatatccagaaggaaatttctgttctgtcccaatgtcgatgtccatacattactgaatattatggttcctatctcaatcaaactaaactttggataataatggaatacatggctggtggctcagttgctgatctaATCCAATCAGGTCCTCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACAGTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGAATACAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGAATCACTGCAATTGAGATGGCAAAGGGGGAGCCGCCACTTGCTGATCTTCACCCAATGAGAGTGCTTTTCATTATACCCCGAGAGAATCCTCCACAGCTAGATGATCATTTTTCTCGTCCATTGAAAGAATTTGTGTCATTGTGCTTAAAGAAGGTTCCTGCTGAGGCAAGTAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATCCGGAATGCTAGGAAGAGTTCAAAGCTTTCAGAAAGAATAAGGGAGCGTCCAAAGTACCAAATAAAGGAAGATGAGGAGACACCCAGAAATGGTCCAAGTGGGATGGGGGAGGCATCAGGTACTGTAAAGGTGGCAAGAGATTTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAATGTTTCTCGACCACCTCAGTTTAGAGATAAGATAACTGAAGTTTCACATAATCAGCTTACTCAGCGAAAAGCTCCACAGAGTGGCTATCAAGGGGGATCTGTCAATAGAAGTGCACTTAATGAGTCACTTGAAAGTTCCTTTGGAAGAGATCTTAGAGTTCCCCACCATGATGAGCATCTGGATAATCACCTTGAAGATGATGAATTATCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGTCATCTGCGTTTCGTGACCAGAGCTCTCAGtctagcagcagctatgcttcttttgaagatgcttcttcaagtggaactgttgttttacgtggccagcatgatgagtctgattctccacagacaccaaggtctcgactgggacttaatgacagaaattcaaatgcctcaatggaagatagtgcagcaaatcttgctgaggcaaaggctgctatcctgaggaaatcaaaTGCTCGAGAGAAACTTGCCCGAGGAAAAATCAACAATGATAGACAGGAAAGCAAAAGAGATCAAAAGgctagtagctctgattcttcaaggtacatccattgcaaaagagctggtaattttctgttgctgaaatgtgaacctacattcttagggattttttttttcagaccacatggtgaatatgatgcacacaagggcatgttaagatcacatcatgctagtgatggcgaagaaagtgctaaaataatgtcatcatcggtgccattatctgttttacttattccttcattaaaagagGCTATTGCTGATGATCCAGAACTCGTGAGGGCAGTTATCAATTCTTTAATAAACATGGAGGGTACAAAACCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGGACTGGCAGACCAACTATTCAGCAAGACCAAGTCAGCTCAAGAAACCCGAAATGCAGAGGCTGATAACAGGAAGAAACAACAAAACAAGGAACATAATTCAAATAGCAATTTAAGCCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCCATCTTGA 2172 0.3149 MADVAGLVEASGSRFSSLELIGQGSFGDVYKAFDRELNKLVAIKVIDLEESEDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLIQSGPPLDEMSIACILRDLLHAVDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPLKEFVSLCLKKVPAEASRPSAKELLKDRFIRNARKSSKLSERIRERPKYQIKEDEETPRNGPSGMGEASGTVKVARDLRGEENNRPSDQGKTLKSAGWDFSIGGSQGTGTFRNVSRPPQFRDKITEVSHNQLTQRKAPQSGYQGGSVNRSALNESLESSFGRDLRVPHHDEHLDNHLEDDELSGNGSGTVVIRSPKGSRSSAFRDQSSQSSSSYASFEDASSSGTVVLRGQHDESDSPQTPRSRLGLNDRNSNASMEDSAANLAEAKAAILRKSNAREKLARGKINNDRQESKRDQKASSSDSSRYIHCKRAGNFLLLKCEPTFLGIFFFRPHGEYDAHKGMLRSHHASDGEESAKIMSSSVPLSVLLIPSLKEAIADDPELVRAVINSLINMEGTKPKSCDVFVKKLLQRLASSKEDSLKDLQGLADQLFSKTKSAQETRNAEADNRKKQQNKEHNSNSNLSPLARFLLSRWQGQTSRDLNPS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02125 723 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02125 723 SUPERFAMILY Protein kinase-like (PK-like) 13 296 IPR011009 -
Gma12g02125 723 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 543 - -
Gma12g02125 723 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 575 721 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 518 540 - -
Gma12g02125 723 Coils Coil 674 694 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 363 387 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 338 354 - -
Gma12g02125 723 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02125 723 CDD STKc_MST3_like 13 289 - -
Gma12g02125 723 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 543 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 673 700 - -
Gma12g02125 723 Gene3D Transferase(Phosphotransferase) domain 1 11 302 - -
Gma12g02125 723 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02125 723 MobiDBLite consensus disorder prediction 276 299 - -
Gma12g02125 723 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gma12g02125 723 MobiDBLite consensus disorder prediction 426 497 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 276 387 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 518 542 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 414 497 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 313 327 - -
Gma12g02125 723 Coils Coil 41 68 - -
Gma12g02125 723 MobiDBLite consensus disorder prediction 678 694 - -
Gma12g02125 723 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 575 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02125 Gma-Chr12 42071262 42081219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02125 1 720 MAP Kinase Kinase Kinase Kinase AT3G15220 64.099 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Gma12g02125 Pkinase 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02125 K08838 - gmx:100815042 1286.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02125 12 42071262 42081219 Gma12g02125 12 42071262 42081219 ECH