Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02124 ATGGTGGGCTCTGGAGCATCAGACAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGACCCTCAGAAGAGTCTGTCTCAACTCAGAATGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTCCGAGGTGGCAATGGCTGCAAGATTGGAGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGAGGTTCAGGATGTCTGGAAGATATTGATGGAGAGGATCCTGTCAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCAAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTTATTCAAGCTGGACATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTTAGAATGCGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAATACTTCCTCATCAACTTCTGTTCCTTCAAAACCATCCACCAATATTCCAATTAGGCCACCTCTTCCACTCTTCAACTGGGGTCAGAGACCACTTACTTCAGCCACTTCCATGCTATCCTCACCCAATTTTCAACATGCAGCTAGGCTTGGGTTTCCAAAAGATGAGGCACACATGTTCCTCATGCCTCATGCATCACCTGAGGGTGCAAGAATCGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGATTGTCTTTCTTCAATGCTCTCACTGGAAGAACGGATGATGCTAAGCTCTTGTTCAATCCTGAGAGCTTGGGGAACAAACCTGGTGATCAGAATCAGCATCACACAATTGGCCAAAACCGCAACTCAGAAGGCTCCAACATGCAAAATGCTAGTGGTGGAGCCAACCCAAATGAGTTCTTGAGCTTGGATAGCCACCAAGATGATGTAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTTCCTGCAAGAGTGGCCTCATCATCTTCATCCACTTCAATGGATCAAcaccaccaccaccaccaccaccaccaccaAGGTGTGGAGTATAGGAATTCAGAAGGAGGTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1266 0.4526 MVGSGASDRSKEAVGMMALHETLRRVCLNSEWTYSVFWTIRPRPRVRGGNGCKIGDDNGSLMLMWEDGFCRGRGSGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTNIPIRPPLPLFNWGQRPLTSATSMLSSPNFQHAARLGFPKDEAHMFLMPHASPEGARIEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGNKPGDQNQHHTIGQNRNSEGSNMQNASGGANPNEFLSLDSHQDDVRKMDKFKRSFTLPARVASSSSSTSMDQHHHHHHHHHQGVEYRNSEGGMYPDVMETFLE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02124 421 MobiDBLite consensus disorder prediction 312 355 - -
Gma12g02124 421 PANTHER GB|AAF34833.1 1 421 IPR044170 -
Gma12g02124 421 MobiDBLite consensus disorder prediction 318 355 - -
Gma12g02124 421 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 87 187 IPR025610 -
Gma12g02124 421 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 73 IPR025610 -
Gma12g02124 421 MobiDBLite consensus disorder prediction 374 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02124 Gma-Chr12 42046452 42049014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02124 20 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.188 7.76e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02124 - - gmx:100814508 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02124 12 42046452 42049014 Gma12g02124 12 42046452 42049014 ECH