Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02118 ATGGAACTTGAGATACGTGCTTGTCTCTTGTTGTTTCTCTTTAGTCTCTTCTCATGCTCTCAAGCCTACACTTTCTATGTTGGTGGGAAAGATGGGTGGGTTTTGTACCCTTCTGAGAATTACAATCATTGGGCTGAAAGGATGAGGTTCCAAGTCAGTGATACTCTTGTTTTTAAGTACAAGAAGGGCTCGGATACTGTGTTGGTGGTGAACAAGGATGATTATGAGAAATGTAACAAGAAGAACCCGATCAAGAAGTTTGAGGATAGTGAATCGGAGTTTCAGTTTGATCGATCGGGTCCATTTTACTTCATTAGTGGGAAAGATGGTAATTGTGAAAAGGGTCAGAAATTGATTATTGTGGTGTTGGCTGTGAGAGAGCCACCTCCTTATTATCCTCCAACACCTCCAAACACTCCCTATGTTCCAATTACTCCTCCAAAAGCACCTTATGTTCCAACACCTCCTCAAACTCCTCCAAAAATTCCTTATCCACCTTATGTTCCAACCCCTCCAAAAACACCTTCTCCTATTCACAGTCCTCCCTATGTTCCTCCTAAAGCACCTTCACCTACTAATCATCCTCCATTtattccaactcctccacaaactccttcccctgtttatactcctcctaatgttccaacacctcccaaaacaccttctcctatttacgcccccccaatagctccttccccgggtaaccatccaccctatgttcctacacctccaaaaacaccttctccttcttatagtcctccaaatgttcccactcctccaaaaacaccttctccagcttatagtcctccaaatgctccttctcctcgtaaccaaccaccctatattccaacgcctccaaaaacaccgtctccttcttatagtcctccaaatgttcccactcctccaaaaacaccttcCCCTGGCAACCAACCTTATGTCCCAACCCCTCCAAACACTCCCTCTCCTATTTCTCAACCTCCCTACACTCCAAACCCTCCAAAAACCCCTTCCCCTACCCATCAACCACCTTTTGTtccaataaccccatctccattttctcaaccaccttatgtcccaaaacctccaaaaaccccctcaccttcttctcagcctcctttcactcctacacctccaaaaaccccatctccaacatctcaaccaccttacatccccacacctccTTCTCCCATTTCCCAACCTCCTTCTATTGCAACACCTCCAAACACTCTTTCCCCAACATCTCAACCACCCTATCCATCCACCATCCCTCCCTCAACCTCACTCTCTCCATCTTACCCACCTTCACCTTCACCTTCATCTGCACCCACTTACCCACCTTCCTACCTGGCTCCGGCAACATCGCCACCATCCCCGTCGACGTCAGCCACCACTCCCACCATTTCTCCGGCAGCAACAACTCCCTCACCGTCGTCGTCGTCGTCGTCGGGGGCGTCGAACGAAACGACGCCAGCCAGACCAAACGGCGCGTCGTCTGTAGCACCGTCGAGGTTAGGGCTGTATTCACTGACCATTCTGGCTGGTGCTGCTCTAAGCACCATTCTTGGTTAG 1569 0.3378 MELEIRACLLLFLFSLFSCSQAYTFYVGGKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKGSDTVLVVNKDDYEKCNKKNPIKKFEDSESEFQFDRSGPFYFISGKDGNCEKGQKLIIVVLAVREPPPYYPPTPPNTPYVPITPPKAPYVPTPPQTPPKIPYPPYVPTPPKTPSPIHSPPYVPPKAPSPTNHPPFIPTPPQTPSPVYTPPNVPTPPKTPSPIYAPPIAPSPGNHPPYVPTPPKTPSPSYSPPNVPTPPKTPSPAYSPPNAPSPRNQPPYIPTPPKTPSPSYSPPNVPTPPKTPSPGNQPYVPTPPNTPSPISQPPYTPNPPKTPSPTHQPPFVPITPSPFSQPPYVPKPPKTPSPSSQPPFTPTPPKTPSPTSQPPYIPTPPSPISQPPSIATPPNTLSPTSQPPYPSTIPPSTSLSPSYPPSPSPSSAPTYPPSYLAPATSPPSPSTSATTPTISPAATTPSPSSSSSSGASNETTPARPNGASSVAPSRLGLYSLTILAGAALSTILG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02118 522 MobiDBLite consensus disorder prediction 454 502 - -
Gma12g02118 522 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma12g02118 522 MobiDBLite consensus disorder prediction 215 502 - -
Gma12g02118 522 PANTHER EARLY NODULIN-LIKE PROTEIN 2 2 331 - -
Gma12g02118 522 CDD OsENODL1_like 23 123 IPR041846 -
Gma12g02118 522 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Gma12g02118 522 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gma12g02118 522 MobiDBLite consensus disorder prediction 215 453 - -
Gma12g02118 522 Gene3D - 21 126 IPR008972 -
Gma12g02118 522 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gma12g02118 522 PANTHER BLUE COPPER PROTEIN 2 331 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02118 Gma-Chr12 41979224 41981352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02118 9 188 Phytocyanin Superfamily AT5G53870 50.000 7.94e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02118 - - gmx:100811987 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02118 12 41979224 41981352 Gma12g02118 12 41979224 41981352 ECH